RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 H7C0C1 242 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 NUAK1O60285 661 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 SNX2O60749 519 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 SLC2A4P14672 509 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 CTNNA2P26232 953 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 SLC5A2P31639 672 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 CD68P34810 354 aaPredicted RBP15.12■□□□□ 0.01
CHD3-205ENST00000449744 CETN2P41208 172 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 ATP5OP48047 213 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 MAPK10P53779 464 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 WNT3AP56704 352 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 COPS2P61201 443 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 BBS12Q6ZW61 710 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 TMPRSS9Q7Z410 1059 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 PHYKPLQ8IUZ5 450 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 ZNF567Q8N184 647 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 AHCYL2Q96HN2 611 aaKnown RBP15.12■□□□□ 0.01
CHD3-205ENST00000449744 QKIQ96PU8 341 aaKnown RBP eCLIP15.12■□□□□ 0.014e-12■■■■■ 71
CHD3-205ENST00000449744 FCRL5Q96RD9 977 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 NUDT22Q9BRQ3 303 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 TRIM39Q9HCM9 518 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 ATXN10Q9UBB4 475 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 NFKBIL1Q9UBC1 381 aaPredicted RBP15.12■□□□□ 0.01
CHD3-205ENST00000449744 RSPH14Q9UHP6 348 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 TRHDEQ9UKU6 1024 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 KCNK6Q9Y257 313 aa15.12■□□□□ 0.01
CHD3-205ENST00000449744 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 F5H423 210 aaPredicted RBP15.11■□□□□ 0.01
CHD3-205ENST00000449744 APOC4-APOC2K7ER74 178 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 EPOP01588 193 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 APOC2P02655 101 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 ZNF8P17098 575 aaPredicted RBP15.11■□□□□ 0.01
CHD3-205ENST00000449744 BPIP17213 487 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 ITIH1P19827 911 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 FECHP22830 423 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 CD1CP29017 333 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 CTNNA1P35221 906 aaKnown RBP15.11■□□□□ 0.01
CHD3-205ENST00000449744 FASLGP48023 281 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 GPLD1P80108 840 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 XRCC4Q13426 336 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 ZNF648Q5T619 568 aaPredicted RBP15.11■□□□□ 0.01
CHD3-205ENST00000449744 ARHGAP40Q5TG30 622 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 NKAIN2Q5VXU1 208 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 KIAA1328Q86T90 577 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 SLC9B2Q86UD5 537 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 SFRP1Q8N474 314 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 SLC25A41Q8N5S1 370 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 IPMKQ8NFU5 416 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 SLC37A2Q8TED4 501 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 DPYSL5Q9BPU6 564 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 HERPUD2Q9BSE4 406 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 OR2AG1Q9H205 316 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 TRABDQ9H4I3 376 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 CPNE5Q9HCH3 593 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 BPIFA1Q9NP55 256 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 TBC1D29Q9UFV1 150 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 PCDHA3Q9Y5H8 950 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 SPO11Q9Y5K1 396 aa15.11■□□□□ 0.01
CHD3-205ENST00000449744 PCYT1BQ9Y5K3 369 aaPredicted RBP15.11■□□□□ 0.01
CHD3-205ENST00000449744 IGHV1OR21-1A0A087WYE8 117 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 LOC285095A0A1B0GVY8 99 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 CCDC66A2RUB6 948 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 RCCD1A6NED2 376 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 GPR89AB7ZAQ6 455 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 AURKAO14965 403 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 NVLO15381 856 aaKnown RBP15.1■□□□□ 0.01
CHD3-205ENST00000449744 EML2O95834 649 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 GPR89BP0CG08 455 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 VAV2P52735 878 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 RWDD2BP57060 319 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 HHEXQ03014 270 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 VAC14Q08AM6 782 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 CLN3Q13286 438 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 MPP3Q13368 585 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 TRA2AQ13595 282 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHD3-205ENST00000449744 C16orf72Q14CZ0 275 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 NOMO1Q15155 1222 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 TMEM164Q5U3C3 297 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 ITPRIPL1Q6GPH6 555 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 IYDQ6PHW0 289 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 CRTC3Q6UUV7 619 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 KDELC1Q6UW63 502 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 RAD9BQ6WBX8 426 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 ADGRG6Q86SQ4 1221 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 ZNF761Q86XN6 746 aaPredicted RBP15.1■□□□□ 0.01
CHD3-205ENST00000449744 OR10G6Q8NH81 332 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 SH3KBP1Q96B97 665 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 CCDC74BQ96LY2 380 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 BBC3Q96PG8 261 aaPredicted RBP15.1■□□□□ 0.01
CHD3-205ENST00000449744 PLEKHG4BQ96PX9 1271 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 FSD1LQ9BXM9 530 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 OSGEPL1Q9H4B0 414 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 HACD3Q9P035 362 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 EFR3BQ9Y2G0 817 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
CHD3-205ENST00000449744 NBEAQ8NFP9 2946 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms