RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 INTS10Q9NVR2 710 aaKnown RBP14.52□□□□□ -0.09
TNF-208ENST00000449264 ZNF180Q9UJW8 692 aa14.52□□□□□ -0.09
TNF-208ENST00000449264 TMPRSS11EQ9UL52 423 aa14.52□□□□□ -0.09
TNF-208ENST00000449264 CEP192Q8TEP8 1941 aa14.52□□□□□ -0.09
TNF-208ENST00000449264 GON4LQ3T8J9 2241 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 TRBV5-4A0A0C4DH59 114 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 IQANK1A0A1B0GTG1 560 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 RAD51BO15315 384 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 MTX2O75431 263 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 KRT38O76015 456 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 ITGA2BP08514 1039 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 KRT15P19012 456 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 SPRP35270 261 aaPredicted RBP14.51□□□□□ -0.09
TNF-208ENST00000449264 SERPINB9P50453 376 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 LIMK2P53671 638 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 DPTQ07507 201 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 GPRC6AQ5T6X5 926 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 CERS6Q6ZMG9 384 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 CROCCP2Q86T23 111 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 TRIM74Q86UV6 250 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 CYP4X1Q8N118 509 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 TP53I13Q8NBR0 393 aaPredicted RBP14.51□□□□□ -0.09
TNF-208ENST00000449264 LPGAT1Q92604 370 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 GLYATL1Q969I3 302 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 TCF12Q99081 682 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 NDNQ99608 321 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 BOCQ9BWV1 1114 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 SMOXQ9NWM0 555 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 KCTD5Q9NXV2 234 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 EURLQ9NYK6 297 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 VPS9D1Q9Y2B5 631 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 ABCA7Q8IZY2 2146 aa14.51□□□□□ -0.09
TNF-208ENST00000449264 AGAP14A8MT82 685 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 FOXO6A8MYZ6 492 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 TRIM49D1C9J1S8 452 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 OPA1O60313 960 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 KRT37O76014 449 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 SLC25A14O95258 325 aaPredicted RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 SAT1P21673 171 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 PPARGP37231 505 aaPredicted RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 FNTBP49356 437 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 AGERQ15109 404 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 USP39Q53GS9 565 aaKnown RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 RBM20Q5T481 1227 aaKnown RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 ZNF648Q5T619 568 aaPredicted RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 LYPLAL1Q5VWZ2 237 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 KIAA0895LQ68EN5 471 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 PNCKQ6P2M8 343 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 GALNT7Q86SF2 657 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 PHYKPLQ8IUZ5 450 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 C1orf210Q8IVY1 113 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 FBXL6Q8N531 539 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 DEFB119Q8N690 84 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 DTX3LQ8TDB6 740 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 LENG8Q96PV6 779 aaPredicted RBP14.5□□□□□ -0.09
TNF-208ENST00000449264 VPS35Q96QK1 796 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 COPS8Q99627 209 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 EPHX3Q9H6B9 360 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 TMBIM4Q9HC24 238 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 ZDHHC3Q9NYG2 299 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 LGALS13Q9UHV8 139 aa14.5□□□□□ -0.09
TNF-208ENST00000449264 FAM95CA0A1B0GW59 222 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 IGHV4-34P06331 123 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 FMO4P31512 558 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 IGFALSP35858 605 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 PTGER3P43115 390 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 RPL6Q02878 288 aaKnown RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 CSTF1Q05048 431 aaKnown RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 DET1Q7L5Y6 550 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 HEATR4Q86WZ0 1026 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 RBFAQ8N0V3 343 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 DCLK2Q8N568 766 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 DTWD2Q8NBA8 298 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 ACVR1CQ8NER5 493 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 BTN2A2Q8WVV5 523 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 SCG3Q8WXD2 468 aaKnown RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 DCUN1D1Q96GG9 259 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 ELMO2Q96JJ3 720 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 KLF6Q99612 283 aaPredicted RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 SH3GL2Q99962 352 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 MCMBPQ9BTE3 642 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 CLPBQ9H078 707 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 CCDC68Q9H2F9 335 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 MBD1Q9UIS9 605 aaPredicted RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 SLC39A10Q9ULF5 831 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 CA5BQ9Y2D0 317 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 MTO1Q9Y2Z2 717 aaKnown RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 HMX2A2RU54 273 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 FAM86C2PA6NEL3 165 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 PRMT5O14744 637 aaPredicted RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 LATO43561 262 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 PYGLP06737 847 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 SNRPAP09012 282 aaKnown RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 ZNF7P17097 686 aaPredicted RBP14.49□□□□□ -0.09
TNF-208ENST00000449264 MSH3P20585 1137 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 BCKDHBP21953 392 aa14.49□□□□□ -0.09
TNF-208ENST00000449264 HNRNPA2B1P22626 353 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms