RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CMTM6Q9NX76 183 aa16.82■□□□□ 0.28
TOM1-210ENST00000449058 RNF186Q9NXI6 227 aa16.82■□□□□ 0.28
TOM1-210ENST00000449058 PCTPQ9UKL6 214 aa16.82■□□□□ 0.28
TOM1-210ENST00000449058 AGO1Q9UL18 857 aaKnown RBP16.82■□□□□ 0.28
TOM1-210ENST00000449058 VPS9D1Q9Y2B5 631 aa16.82■□□□□ 0.28
TOM1-210ENST00000449058 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 ENPP3O14638 875 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 PYGLP06737 847 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 LPOP22079 712 aaPredicted RBP16.81■□□□□ 0.28
TOM1-210ENST00000449058 CES1P23141 567 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 SH3BGRP55822 239 aaPredicted RBP16.81■□□□□ 0.28
TOM1-210ENST00000449058 ECT2LQ008S8 904 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 GRIK2Q13002 908 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 XKR7Q5GH72 579 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 LCN8Q6JVE9 175 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 PPP4R4Q6NUP7 873 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 TXNDC11Q6PKC3 985 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 RBM44Q6ZP01 1051 aaKnown RBP16.81■□□□□ 0.28
TOM1-210ENST00000449058 PIANPQ8IYJ0 282 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 GOLM1Q8NBJ4 401 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 LRRC58Q96CX6 371 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 TRIM15Q9C019 465 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 C9JVG2 144 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 BTN3A1O00481 513 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 GJB5O95377 273 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 ESRRBO95718 433 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 PKMP14618 531 aaKnown RBP16.81■□□□□ 0.28
TOM1-210ENST00000449058 ATP6V1B1P15313 513 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 DIO3P55073 304 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 ELAVL2Q12926 359 aaKnown RBP16.81■□□□□ 0.28
TOM1-210ENST00000449058 PSAPL1Q6NUJ1 521 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 ANKS3Q6ZW76 656 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 SYVN1Q86TM6 617 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 FAM110BQ8TC76 370 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 GRIP2Q9C0E4 1043 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 AIG1Q9NVV5 245 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 ZNF225Q9UK10 706 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 TIMM22Q9Y584 194 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 PCDHB7Q9Y5E2 793 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 PCDHA9Q9Y5H5 950 aa16.81■□□□□ 0.28
TOM1-210ENST00000449058 VPS26AO75436 327 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 CYBBP04839 570 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 PRDX3P30048 256 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 ZFP36L2P47974 494 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 AGTR2P50052 363 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 SGSHP51688 502 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 YBX1P67809 324 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 PRKCQQ04759 706 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 CAPRIN1Q14444 709 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 RBBP5Q15291 538 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 RPS6KA2Q15349 733 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 MYLK3Q32MK0 819 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 FBXO48Q5FWF7 155 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 CTSL3PQ5NE16 218 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 EFL1Q7Z2Z2 1120 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 DENND1CQ8IV53 801 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 LPCAT1Q8NF37 534 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 PPWD1Q96BP3 646 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 ACTR3BQ9P1U1 418 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 RAI2Q9Y5P3 530 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 A0A1W2PP18 115 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 HTRA2O43464 458 aaPredicted RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 CRCPO75575 148 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 MLYCDO95822 493 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 KLKB1P03952 638 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 RHOCP08134 193 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 UROSP10746 265 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 CHRM3P20309 590 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 TTPAP49638 278 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 NR1H2P55055 460 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 RCAN2Q14206 197 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 ADRM1Q16186 407 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 KLHDC10Q6PID8 442 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 PRSS55Q6UWB4 352 aaPredicted RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 CHST9Q7L1S5 443 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 CEP295NLQ96MC4 621 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 TTPALQ9BTX7 342 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 TRIM54Q9BYV2 358 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 DUS2Q9NX74 493 aaKnown RBP16.8■□□□□ 0.28
TOM1-210ENST00000449058 PTTG2Q9NZH5 202 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 FKBPLQ9UIM3 349 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 PCDHGC4Q9Y5F7 938 aa16.8■□□□□ 0.28
TOM1-210ENST00000449058 ASPDHA6ND91 283 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 ANKRD66B4E2M5 251 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 NT5C1B-RDH14C9J2C7 533 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 HNRNPRO43390 633 aaKnown RBP16.79■□□□□ 0.28
TOM1-210ENST00000449058 AKAP10O43572 662 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 OR1I1O60431 355 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 NIPSNAP2O75323 286 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 MC4RP32245 332 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 CLCN4P51793 760 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 HK3P52790 923 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 NHSL2Q5HYW2 709 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 BORAQ6PGQ7 559 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 ZBTB49Q6ZSB9 765 aa16.79■□□□□ 0.28
TOM1-210ENST00000449058 MYO1HQ8N1T3 1032 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms