RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CKMT1AP12532 417 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 DCDC1P59894 354 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 OLIG2Q13516 323 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 LONRF2Q1L5Z9 754 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 C6orf132Q5T0Z8 1188 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 MARK2Q7KZI7 788 aaKnown RBP14.46□□□□□ -0.09
USP39-206ENST00000448971 TMC3Q7Z5M5 1100 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 ZNF248Q8NDW4 579 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 GLMNQ92990 594 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 ZNF578Q96N58 590 aaPredicted RBP14.46□□□□□ -0.09
USP39-206ENST00000448971 TBL1YQ9BQ87 522 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 CDH19Q9H159 772 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 BPIFA1Q9NP55 256 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 SIRPGQ9P1W8 387 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 SUFUQ9UMX1 484 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 RP1P56715 2156 aa14.46□□□□□ -0.1
USP39-206ENST00000448971 LY6G6EA0A0G2JKS1 128 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 FADS2P1A8MWK0 482 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 TPP1O14773 563 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 OPA1O60313 960 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 USP12O75317 370 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 MPOP05164 745 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 MYF5P13349 255 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 SPAM1P38567 509 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 POLD2P49005 469 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 DUSP3P51452 185 aaPredicted RBP14.45□□□□□ -0.1
USP39-206ENST00000448971 ILF3Q12906 894 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP39-206ENST00000448971 SPARCL1Q14515 664 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 NR0B2Q15466 257 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 OASLQ15646 514 aaKnown RBP14.45□□□□□ -0.1
USP39-206ENST00000448971 PARP6Q2NL67 630 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 TAF8Q7Z7C8 310 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 NLRP8Q86W28 1048 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 PHYKPLQ8IUZ5 450 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 REXO1L1PQ8IX06 675 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 SLC35F6Q8N357 371 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 TRAM1L1Q8N609 369 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 FAM181AQ8N9Y4 354 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 GPR26Q8NDV2 337 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 EID2BQ96D98 161 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 WBP1Q96G27 269 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 OR2M4Q96R27 311 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 WDR24Q96S15 920 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 ZSCAN5AQ9BUG6 496 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 TMEM168Q9H0V1 697 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 LRRC40Q9H9A6 602 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 NCKIPSDQ9NZQ3 722 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 NFKBIL1Q9UBC1 381 aaPredicted RBP14.45□□□□□ -0.1
USP39-206ENST00000448971 SLC17A4Q9Y2C5 497 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 TMEM98Q9Y2Y6 226 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 PKP3Q9Y446 797 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 JRKLQ9Y4A0 524 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 U3KQA8 63 aa14.45□□□□□ -0.1
USP39-206ENST00000448971 KIF26BQ2KJY2 2108 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 B4DGG1 531 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 YY2O15391 372 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 BUD23O43709 281 aaKnown RBP14.44□□□□□ -0.1
USP39-206ENST00000448971 METTL18O95568 372 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 ATP1A1P05023 1023 aaKnown RBP14.44□□□□□ -0.1
USP39-206ENST00000448971 CEACAM5P06731 702 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 IVLP07476 585 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 BPIP17213 487 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 STIP1P31948 543 aaKnown RBP14.44□□□□□ -0.1
USP39-206ENST00000448971 HMGCLP35914 325 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 LSSP48449 732 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 RPIAP49247 311 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 ZDHHC20Q5W0Z9 365 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 GALNT13Q8IUC8 556 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 ARL10Q8N8L6 244 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 KYQ8NBH2 561 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 PTCD2Q8WV60 388 aaKnown RBP14.44□□□□□ -0.1
USP39-206ENST00000448971 RTP4Q96DX8 246 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 NAF1Q96HR8 494 aaKnown RBP14.44□□□□□ -0.1
USP39-206ENST00000448971 PLEKHG4BQ96PX9 1271 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 GSDMCQ9BYG8 508 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 CPNE5Q9HCH3 593 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 GULP1Q9UBP9 304 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 GPR34Q9UPC5 381 aa14.44□□□□□ -0.1
USP39-206ENST00000448971 CPED1A4D0V7 1026 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 E7EVH7 732 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 STX7O15400 261 aaKnown RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 GP1BAP07359 652 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 ADRA1AP35348 466 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 MLLT3P42568 568 aaPredicted RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 LMAN1P49257 510 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 PCBP4P57723 403 aaKnown RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 ERVPABLB-1P60509 514 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 SIX1Q15475 284 aaPredicted RBP14.43□□□□□ -0.1
USP39-206ENST00000448971 PDPK2PQ6A1A2 396 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 LVRNQ6Q4G3 990 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 FAM151BQ6UXP7 276 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 RANBP10Q6VN20 620 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 SLC35F3Q8IY50 421 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 LSMEM2Q8N112 164 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 SDR16C5Q8N3Y7 309 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 TTC30BQ8N4P2 665 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 CCL4L1Q8NHW4 92 aa14.43□□□□□ -0.1
USP39-206ENST00000448971 GDAP1Q8TB36 358 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms