RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TRMT6Q9UJA5 497 aaKnown RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 PCDHB1Q9Y5F3 818 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 A0A1W2PQ67 120 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 TMEM233B4DJY2 109 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 UBXN8O00124 270 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 HOXC11O43248 304 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 ADH5P11766 374 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 LHCGRP22888 699 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 RPS3P23396 243 aaKnown RBP eCLIP17.57■□□□□ 0.46e-9■■■■□ 22.1
LMNA-208ENST00000448611 CLCN7P51798 805 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 PTPN5P54829 565 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 HERVK_113P63132 956 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 SEMG2Q02383 582 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 RIPK1Q13546 671 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 UNC50Q53HI1 259 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 SH2D4BQ5SQS7 431 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 GDPD4Q6W3E5 623 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 GPR26Q8NDV2 337 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 EXT2Q93063 718 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 ASIC4Q96FT7 647 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 TRMOQ9BU70 441 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 ERVK-6Q9BXR3 956 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 OSBPL1AQ9BXW6 950 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 NUF2Q9BZD4 464 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 WDR55Q9H6Y2 383 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 EML4Q9HC35 981 aaKnown RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 IQCF5A8MTL0 148 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 TTC34A8MYJ7 566 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 E9PBE3 544 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 KLHL41O60662 606 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 ZNF7P17097 686 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 CHRM3P20309 590 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 ACRV1P26436 265 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 PPARGP37231 505 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 CPA2P48052 419 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 DGKGP49619 791 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 VASPP50552 380 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 PTSQ03393 145 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 CHRNA6Q15825 494 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 FAM78AQ5JUQ0 283 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 CUZD1Q86UP6 607 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 C12orf40Q86WS4 652 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 PTGR2Q8N8N7 351 aaPredicted RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 TIFAQ96CG3 184 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 BOCQ9BWV1 1114 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 CADM1Q9BY67 442 aaKnown RBP17.57■□□□□ 0.4
LMNA-208ENST00000448611 TNFRSF12AQ9NP84 129 aa17.57■□□□□ 0.4
LMNA-208ENST00000448611 GOLGA8QA0A0J9YX86 632 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 A0A1W2PPC1 479 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 GOLGA8OA6NCC3 632 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 AGAP14A8MT82 685 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 A8MUI8 341 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 E5RI56 91 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 GOLGA8NF8WBI6 632 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 CDC7O00311 574 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 GYG2O15488 501 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UGT1A6P19224 532 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UGT1A1P22309 533 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UGT1A4P22310 534 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 EPHA3P29320 983 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UGT1A3P35503 534 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UGT1A5P35504 534 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 RECQLP46063 649 aaPredicted RBP17.56■□□□□ 0.4
LMNA-208ENST00000448611 IL2P60568 153 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 TSNQ15631 228 aaKnown RBP17.56■□□□□ 0.4
LMNA-208ENST00000448611 LSM12Q3MHD2 195 aaKnown RBP17.56■□□□□ 0.4
LMNA-208ENST00000448611 GPR33Q49SQ1 333 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 RBFAQ8N0V3 343 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 EEF1AKMT1Q8WVE0 214 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 FUBP1Q96AE4 644 aaKnown RBP17.56■□□□□ 0.4
LMNA-208ENST00000448611 KLHL32Q96NJ5 620 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 ASB16Q96NS5 453 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 HEPHQ9BQS7 1158 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 LMAN2LQ9H0V9 348 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 GTSE1Q9NYZ3 720 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 WASF2Q9Y6W5 498 aa17.56■□□□□ 0.4
LMNA-208ENST00000448611 UBFD1O14562 309 aaKnown RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 GSC2O15499 205 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 SUPT7LO94864 414 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 ATP6V1G2O95670 118 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 ADH1CP00326 375 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 NCF2P19878 526 aaPredicted RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 KDSRQ06136 332 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 PDCD2Q16342 344 aaPredicted RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 PFKFB4Q16877 469 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 PRPF38BQ5VTL8 546 aaKnown RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 LYPLAL1Q5VWZ2 237 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 UGT3A1Q6NUS8 523 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 CPNE9Q8IYJ1 553 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 PHTF2Q8N3S3 785 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 TEX9Q8N6V9 391 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 BPIFB1Q8TDL5 484 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 LINGO1Q96FE5 620 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 MAELQ96JY0 434 aaKnown RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 PPP1R36Q96LQ0 422 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 TTC1Q99614 292 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 CIPCQ9C0C6 399 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms