RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PROSER1Q86XN7 944 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 KIAA2013Q8IYS2 634 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 OFCC1Q8IZS5 231 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 OR4L1Q8NH43 312 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 VPS33AQ96AX1 596 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 THAP11Q96EK4 314 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 SLC30A3Q99726 388 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 TRIM8Q9BZR9 551 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 AP5M1Q9H0R1 490 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 Q9Y3F1 56 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 LCHNA4D1U4 455 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 SUPT3HB4E1H0 165 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 ZSCAN9O15535 394 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-204ENST00000447182 SUPT3HO75486 399 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 CPNE6O95741 557 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 ETFBP38117 255 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 PBX3P40426 434 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 PURAQ00577 322 aaKnown RBP18.96■□□□□ 0.63
SDCBP-204ENST00000447182 GPR107Q5VW38 600 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 KCTD8Q6ZWB6 473 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 MON1AQ86VX9 555 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 IFNEQ86WN2 208 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 MAGEE2Q8TD90 523 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-204ENST00000447182 BORCS5Q969J3 196 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 SEMA4BQ9NPR2 832 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-204ENST00000447182 RNF112Q9ULX5 631 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 CLEC11AQ9Y240 323 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 GBF1Q92538 1859 aa18.96■□□□□ 0.63
SDCBP-204ENST00000447182 GRXCR2A6NFK2 248 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 CCDC154A6NI56 674 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 STX16O14662 325 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF623O75123 536 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 CRCPO75575 148 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SLC22A3O75751 556 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SNAP29O95721 258 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 HNRNPCP07910 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
SDCBP-204ENST00000447182 INHBBP09529 407 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 NCK1P16333 377 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 TBX4P57082 545 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 IL31Q6EBC2 164 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 FAM117BQ6P1L5 589 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 TBC1D15Q8TC07 691 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 BLOC1S5Q8TDH9 187 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 BPIFB1Q8TDL5 484 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 BDH2Q9BUT1 245 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 POLR1EQ9GZS1 481 aaKnown RBP18.95■□□□□ 0.62
SDCBP-204ENST00000447182 TBC1D23Q9NUY8 699 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 FLRT1Q9NZU1 646 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 ZIM2Q9NZV7 527 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SCML2Q9UQR0 700 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SYCE1LA8MT33 242 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 KLK8O60259 260 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 ESRRBO95718 433 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 ENO2P09104 434 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-204ENST00000447182 UROSP10746 265 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 TYMPP19971 482 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 EMX2Q04743 252 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 PTPRCAPQ14761 206 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SETMARQ53H47 684 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-204ENST00000447182 AARS2Q5JTZ9 985 aaKnown RBP18.95■□□□□ 0.62
SDCBP-204ENST00000447182 MORN1Q5T089 497 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 NANOGP8Q6NSW7 305 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 OR13C4Q8NGS5 318 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 HASPINQ8TF76 798 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 BIRC7Q96CA5 298 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SUSD3Q96L08 255 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 SEMA3CQ99985 751 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 NANOGQ9H9S0 305 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 PFDN4Q9NQP4 134 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 MED16Q9Y2X0 877 aa18.95■□□□□ 0.62
SDCBP-204ENST00000447182 TDRD15B5MCY1 1934 aaKnown RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 A0A1W2PPW3 197 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 ECI2O75521 394 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 BAIAP3O94812 1187 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CHEK2O96017 543 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 POMCP01189 267 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 JUNBP17275 347 aaPredicted RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 HRH2P25021 359 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 POLR2JP52435 117 aaKnown RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 UFM1P61960 85 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 ECT2LQ008S8 904 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CRY1Q16526 586 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 PAQR3Q6TCH7 311 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TMEM26Q6ZUK4 368 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 ISG20Q96AZ6 181 aaKnown RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 PARK7Q99497 189 aaKnown RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TAS2R13Q9NYV9 303 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TIMM22Q9Y584 194 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 FAM234BA2RU67 622 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TMX2-CTNND1H3BSU7 103 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CBFA2T3O75081 653 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 MLYCDO95822 493 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 C1RP00736 705 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CHRNA1P02708 482 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 ERVK-8P63133 956 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 RAD51Q06609 339 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 SERINC3Q13530 473 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms