RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SH3BP2P78314 561 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 SATB1Q01826 763 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 UBE3AQ05086 875 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 CUL3Q13618 768 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 FBXO48Q5FWF7 155 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
SMC6-206ENST00000446852 SERPINA9Q86WD7 417 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 CPNE9Q8IYJ1 553 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 PELI3Q8N2H9 469 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 STK40Q8N2I9 435 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 MYLIPQ8WY64 445 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 LINGO1Q96FE5 620 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 BOCQ9BWV1 1114 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 SARS2Q9NP81 518 aaKnown RBP17.32■□□□□ 0.36
SMC6-206ENST00000446852 SPHK2Q9NRA0 654 aa17.32■□□□□ 0.36
SMC6-206ENST00000446852 E5RI56 91 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 C5orf67F2Z3F1 127 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 PRMT5O14744 637 aaPredicted RBP17.31■□□□□ 0.36
SMC6-206ENST00000446852 PER2O15055 1255 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 PABPC1P11940 636 aaKnown RBP17.31■□□□□ 0.36
SMC6-206ENST00000446852 CCNHP51946 323 aaPredicted RBP17.31■□□□□ 0.36
SMC6-206ENST00000446852 NFATC2Q13469 925 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 ACCSLQ4AC99 568 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 LY6G5CQ5SRR4 150 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 CEP70Q8NHQ1 597 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 ING5Q8WYH8 240 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 ECHDC3Q96DC8 303 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 EBF2Q9HAK2 575 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 WNT6Q9Y6F9 365 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 COMMD10Q9Y6G5 202 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 NUP210Q8TEM1 1887 aaPredicted RBP17.31■□□□□ 0.36
SMC6-206ENST00000446852 TRIM24O15164 1050 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 CDK14O94921 469 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 ANP32DO95626 131 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 INHBCP55103 352 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 IL2P60568 153 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 PPP1R3AQ16821 1122 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 WLSQ5T9L3 541 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 CERS6Q6ZMG9 384 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 DPY19L3Q6ZPD9 716 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 RAB44Q7Z6P3 723 aaPredicted RBP17.31■□□□□ 0.36
SMC6-206ENST00000446852 FBXO39Q8N4B4 442 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 AFAP1L2Q8N4X5 818 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 PANX3Q96QZ0 392 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 ASB8Q9H765 288 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 DCLRE1BQ9H816 532 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 REV3LO60673 3130 aa17.31■□□□□ 0.36
SMC6-206ENST00000446852 SLC22A2O15244 555 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 KRT36O76013 467 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 CEBPBP17676 345 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 CBX2Q14781 532 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT3A2Q3SY77 523 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 TMEM215Q68D42 235 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 CRTC1Q6UUV9 634 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 SNX20Q7Z614 316 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 NET1Q7Z628 596 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 ADIPOR2Q86V24 386 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 ACTRT2Q8TDY3 377 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.3■□□□□ 0.367e-7■■■■■ 52
SMC6-206ENST00000446852 LYSMD1Q96S90 227 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 C19orf43Q9BQ61 176 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 LBHD1Q9BQE6 289 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 RTKNQ9BST9 563 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 ZDHHC6Q9H6R6 413 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 ZBTB26Q9HCK0 441 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 NOP53Q9NZM5 478 aaKnown RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 RWDD3Q9Y3V2 267 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 TRBV5-4A0A0C4DH59 114 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 A0A1B0GTL3 188 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 RGSL1A5PLK6 1076 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 NCF1BA6NI72 391 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 NCF1CA8MVU1 366 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 XYLBO75191 536 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 HNRNPA1P09651 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMC6-206ENST00000446852 NCF1P14598 390 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT1A6P19224 532 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT1A1P22309 533 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT1A4P22310 534 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 EEF1DP29692 281 aaKnown RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT1A3P35503 534 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 UGT1A5P35504 534 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 HK3P52790 923 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 ECT2LQ008S8 904 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 PREPLQ4J6C6 727 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 RIPOR1Q6ZS17 1223 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 Q6ZVU0 165 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 CHSY3Q70JA7 882 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 DEFB107AQ8IZN7 70 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
SMC6-206ENST00000446852 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 SUV39H2Q9H5I1 410 aa17.3■□□□□ 0.36
SMC6-206ENST00000446852 GLYATL1P3A0A0U1RQE8 302 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 THRAP10827 490 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 GNAZP19086 355 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 FOXA1P55317 472 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CARD16Q5EG05 197 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms