RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 APODP05090 189 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 OGNP20774 298 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 KCNA5P22460 613 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 NFKBIAP25963 317 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PMLP29590 882 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CRHR1P34998 444 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 GRIA2P42262 883 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 POLD2P49005 469 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CLCN5P51795 746 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 NEK3P51956 506 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 EMP3P54852 163 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF234Q14588 700 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 HNRNPA1L2Q32P51 320 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 LVRNQ6Q4G3 990 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SERPINA13PQ6UXR4 307 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TPRG1Q6ZUI0 275 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CMC1Q7Z7K0 106 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SCAIQ8N9R8 606 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CSGALNACT1Q8TDX6 532 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 C19orf43Q9BQ61 176 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SLC39A3Q9BRY0 314 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 VPS11Q9H270 941 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 BPIFA1Q9NP55 256 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 NKX1-2Q9UD57 310 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 FKBPLQ9UIM3 349 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PPIL1Q9Y3C6 166 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 A0A0U1RQS6 177 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 EDDM13A0A1B0GTR0 161 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 FAM95CA0A1B0GW59 222 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 EIF4E1BA6NMX2 242 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 A8MUI8 341 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 H7C0S8 307 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GLRA3O75311 464 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MPOP05164 745 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GSTT2P0CG29 244 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GSTT2BP0CG30 244 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 BMP1P13497 986 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SAT1P21673 171 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MC4RP32245 332 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MAGEA12P43365 314 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SERPINB4P48594 390 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SLC12A2P55011 1212 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PDE1CQ14123 709 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CNSTQ6PJW8 725 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 LDB1Q86U70 411 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 ALDH16A1Q8IZ83 802 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SCG3Q8WXD2 468 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CHMP6Q96FZ7 201 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MCCC1Q96RQ3 725 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CCDC68Q9H2F9 335 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 EPB41L1Q9H4G0 881 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CCDC134Q9H6E4 229 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CAB39LQ9H9S4 337 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PFDN4Q9NQP4 134 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 DCDC2Q9UHG0 476 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 TLK1Q9UKI8 766 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GRID1Q9ULK0 1009 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 A0A096LPK6 155 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 NPIPB15A6NHN6 443 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PFDN6O15212 129 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CLDN7O95471 211 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 S1PR4O95977 384 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PRNPP04156 253 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 EIF2B5Q13144 721 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SKIV2LQ15477 1246 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CDHR3Q6ZTQ4 885 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 RAPH1Q70E73 1250 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SFTPA1Q8IWL2 248 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CKAP2Q8WWK9 683 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 EID2BQ96D98 161 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CHFRQ96EP1 664 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 ELMO2Q96JJ3 720 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GBP5Q96PP8 586 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 FAM111AQ96PZ2 611 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 TCF12Q99081 682 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SLC7A5P2Q9GIP4 190 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SLC17A7Q9P2U7 560 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PLLPQ9Y342 182 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 A8MX80 341 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 C2P06681 752 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MSL3P1P0C860 447 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 HLA-EP13747 358 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 STMN1P16949 149 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 XPAP23025 273 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 FOXN2P32314 431 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 STC1P52823 247 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 POU4F1Q01851 419 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 OCRLQ01968 901 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 CDKN3Q16667 212 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 AAK1Q2M2I8 961 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 TAF1BQ53T94 588 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF805Q5CZA5 627 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF789Q5FWF6 425 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 PPM1JQ5JR12 505 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 AARS2Q5JTZ9 985 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms