RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 NDUFV1P49821 464 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 UGT2B15P54855 530 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GDF10P55107 478 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SP2Q02086 613 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SLC25A11Q02978 314 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PWP1Q13610 501 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CBX2Q14781 532 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 NRF1Q16656 503 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CA9Q16790 459 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TIGD5Q53EQ6 642 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ARL13AQ5H913 290 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 NCBP2-AS2Q69YL0 99 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PPP4R4Q6NUP7 873 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TAPT1Q6NXT6 567 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TIFABQ6ZNK6 161 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 C17orf64Q86WR6 236 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 HIPK1Q86Z02 1210 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 OFCC1Q8IZS5 231 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MAB21L3Q8N8X9 362 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GLB1L3Q8NCI6 653 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 OR52L1Q8NGH7 329 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GPR152Q8TDT2 470 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 RNFT2Q96EX2 444 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 C8orf48Q96LL4 319 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 BTBD9Q96Q07 612 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GATA5Q9BWX5 397 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ROGDIQ9GZN7 287 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MFSD1Q9H3U5 465 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SERHL2Q9H4I8 314 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PCDH12Q9NPG4 1184 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SERHLQ9NQF3 203 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 DNAJB4Q9UDY4 337 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 RSL24D1Q9UHA3 163 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MRPL42Q9Y6G3 142 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 FAM25AB3EWG3 89 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 FAM25CB3EWG5 89 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 FAM25GB3EWG6 89 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TLL1O43897 1013 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GOT2P00505 430 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 IL1BP01584 269 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 APODP05090 189 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PTPN2P17706 415 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 IDH3AP50213 366 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MPP1Q00013 466 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SPANXN2Q5MJ10 180 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ARMC4Q5T2S8 1044 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 RINLQ6ZS11 566 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CHST9Q7L1S5 443 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CHMP1BQ7LBR1 199 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ZC3H7AQ8IWR0 971 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 OR8H2Q8N162 312 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SRFBP1Q8NEF9 429 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 DCAKDQ8WVC6 231 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 BRI3BPQ8WY22 251 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MFSD3Q96ES6 412 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 DEFB118Q96PH6 123 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 FAM83DQ9H4H8 585 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 C3orf14Q9HBI5 128 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 MRM3Q9HC36 420 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ZDHHC4Q9NPG8 344 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SEMA3GQ9NS98 782 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 INTS7Q9NVH2 962 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ZNHIT2Q9UHR6 403 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF490Q9ULM2 529 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 NT5C1B-RDH14C9J2C7 533 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TMEM63AO94886 807 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ELNP15502 786 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SLC26A3P40879 764 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CDH13P55290 713 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 COPZ1P61923 177 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GPR33Q49SQ1 333 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 CEP78Q5JTW2 689 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TRIQKQ629K1 86 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SPESP1Q6UW49 350 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 IFNL1Q8IU54 200 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 NLGN2Q8NFZ4 835 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 S100ZQ8WXG8 99 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SHISA4Q96DD7 197 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 REXO5Q96IC2 774 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 NPAS2Q99743 824 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 PAIP1Q9H074 479 aaKnown RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 WDR55Q9H6Y2 383 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 IFT80Q9P2H3 777 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-202ENST00000441024 DEC1Q9P2X7 70 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 TRPS1Q9UHF7 1281 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 IKZF3Q9UKT9 509 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 SATB2Q9UPW6 733 aa6.36□□□□□ -1.39
CNOT1-202ENST00000441024 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-202ENST00000441024 ILVBLA1L0T0 632 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 PTGES3LE9PB15 166 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 NEDD8-MDP1E9PL57 170 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 MGRN1O60291 552 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 PIAS1O75925 651 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 NR2F1P10589 423 aa6.35□□□□□ -1.39
CNOT1-202ENST00000441024 BLVRAP53004 296 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms