RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TMEM132DQ14C87 1099 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 RAB30Q15771 203 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 UGP2Q16851 508 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 C6orf183Q5T699 404 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 PIWIL3Q7Z3Z3 882 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 DENND6AQ8IWF6 608 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 PARP8Q8N3A8 854 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 TTC30BQ8N4P2 665 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 ARL10Q8N8L6 244 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 MAGED4Q96JG8 741 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 MUS81Q96NY9 551 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 LPIN3Q9BQK8 851 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 MRPL45Q9BRJ2 306 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 C17orf80Q9BSJ5 609 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 WDR12Q9GZL7 423 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 NXF3Q9H4D5 531 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 INTS10Q9NVR2 710 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 VPS51Q9UID3 782 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 ERVK-11Q9UQG0 969 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 NDUFAF1Q9Y375 327 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 A0A0J9YYE9 177 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ALBP02768 609 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 EIF2S1P05198 315 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 NCAM1P13591 858 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 KCNA5P22460 613 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 POLD2P49005 469 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 SULT1E1P49888 294 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 KPNA2P52292 529 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 CTBP1Q13363 440 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 KIF19Q2TAC6 998 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 LARP4Q71RC2 724 aaKnown RBP eCLIP8.52□□□□□ -1.05
HPS4-206ENST00000439453 MINDY1Q8N5J2 469 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ELMO2Q96JJ3 720 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 NSMCE3Q96MG7 304 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 CTRCQ99895 268 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 AKIP1Q9NQ31 210 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 SUN2Q9UH99 717 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 IPPQ9Y573 584 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 INSL6Q9Y581 213 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 BCAS1O75363 584 aaPredicted RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 LDLRP01130 860 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 UGT2B4P06133 528 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ALDOCP09972 364 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 MTHFD1P11586 935 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 SHMT2P34897 504 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 RCVRNP35243 200 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 TAS2R39P59534 338 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ERVK-21P61565 698 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 VPS26BQ4G0F5 336 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 TBPL2Q6SJ96 375 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ANKRD13BQ86YJ7 626 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 KIFC1Q9BW19 673 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 ING2Q9H160 280 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 FAM124BQ9H5Z6 455 aaPredicted RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 ASB7Q9H672 318 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 PRMT7Q9NVM4 692 aaPredicted RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 DPP3Q9NY33 737 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 GMIPQ9P107 970 aa8.52□□□□□ -1.05
HPS4-206ENST00000439453 DNMT3BQ9UBC3 853 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 WARS2Q9UGM6 360 aaKnown RBP8.52□□□□□ -1.05
HPS4-206ENST00000439453 SYNJ2BP-COX16A0A087WUM0 186 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 A0A087X1B8 175 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 A8MT66 165 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 C5orf67F2Z3F1 127 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 H0Y858 1186 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 EEF2KO00418 725 aaKnown RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 IPO13O94829 963 aaKnown RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 MYO1DO94832 1006 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 NFKB1P19838 968 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 TGM1P22735 817 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 NR4A1P22736 598 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 GSTM2P28161 218 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 LEPRP48357 1165 aaKnown RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 YBX1P67809 324 aaKnown RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 IFITM3Q01628 133 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 CSHL1Q14406 222 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 ZIK1Q3SY52 487 aaPredicted RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 CLEC6AQ6EIG7 209 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 CYHR1Q6ZMK1 362 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 SNX29P2Q8IUI4 249 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 TBC1D21Q8IYX1 336 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.51□□□□□ -1.05
HPS4-206ENST00000439453 FKBP10Q96AY3 582 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 EHD1Q9H4M9 534 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 MRM3Q9HC36 420 aaKnown RBP8.51□□□□□ -1.05
HPS4-206ENST00000439453 TLR9Q9NR96 1032 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 IGSF5Q9NSI5 407 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 UBP1Q9NZI7 540 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 COX16Q9P0S2 106 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 ANKMY1Q9P2S6 941 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 ZNF639Q9UID6 485 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 ANAPC2Q9UJX6 822 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 TCRBV5S2A0A599 114 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 FXYD1O00168 92 aa8.51□□□□□ -1.05
HPS4-206ENST00000439453 RFXAPO00287 272 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms