RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HTRA2O43464 458 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SORBS2O94875 1100 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ABCB1P08183 1280 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IQCF3P0C7M6 154 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 COX7A2P14406 83 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ALOX12P18054 663 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 RXRGP48443 463 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IDH2P48735 452 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 EEFSECP57772 596 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 HPCAP84074 193 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IRF8Q02556 426 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SULT2A1Q06520 285 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SLC10A7Q0GE19 358 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 HSPA14Q0VDF9 509 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SPIDRQ14159 915 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 EGFLAMQ63HQ2 1017 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 GALNT18Q6P9A2 607 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 DENND1CQ8IV53 801 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 OR8H2Q8N162 312 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 AMER2Q8N7J2 671 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PDPRQ8NCN5 879 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ARNTL2Q8WYA1 636 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CENPIQ92674 756 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 EMID1Q96A84 441 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ESAMQ96AP7 390 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZHX1-C8orf76Q96EF9 292 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF778Q96MU6 729 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF696Q9H7X3 374 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 EIF2B4Q9UI10 523 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PTBP2Q9UKA9 531 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ITGB1BP2Q9UKP3 347 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 EMCNQ9ULC0 261 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SAMHD1Q9Y3Z3 626 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ARIH1Q9Y4X5 557 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PDE4DIPQ5VU43 2346 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZCWPW2A0A1B0GU75 182 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 MOXD2PA6NHM9 499 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PDZK1P1A8MUH7 402 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 RFXANKO14593 260 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ASNA1O43681 348 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IGSF6O95976 241 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CAPN1P07384 714 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PFKMP08237 780 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF12P17014 697 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 HDCP19113 662 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SLC26A3P40879 764 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 GSK3BP49841 420 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PGGT1BP53609 377 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ST8SIA6P61647 398 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ERVK-8P63133 956 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF423Q2M1K9 1284 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF284Q2VY69 593 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PIGGQ5H8A4 983 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PAQR3Q6TCH7 311 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF605Q86T29 641 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SLCO6A1Q86UG4 719 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 HIPK1Q86Z02 1210 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TP53INP2Q8IXH6 220 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 RBFAQ8N0V3 343 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SPPL2BQ8TCT7 592 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 STARD8Q92502 1023 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 C2orf49Q9BVC5 232 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TDRD1Q9BXT4 1180 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 LRRC3Q9BY71 257 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 C20orf27Q9GZN8 174 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 LIN28AQ9H9Z2 209 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CCNB1IP1Q9NPC3 277 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CRTAC1Q9NQ79 661 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 MOSPD1Q9UJG1 213 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PADI3Q9ULW8 664 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ASB3Q9Y575 518 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TLL2Q9Y6L7 1015 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 LOC100506127A0A0U1RQW1 187 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 FAM234BA2RU67 622 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 KLHL33A6NCF5 533 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 NTRK1P04629 796 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 SERPIND1P05546 499 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TYMPP19971 482 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ACADVLP49748 655 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CLCN2P51788 898 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 MLLT6P55198 1093 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 MYLK3Q32MK0 819 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ARMCX4Q5H9R4 360 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TRNP1Q6NT89 227 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ZCCHC8Q6NZY4 707 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CHSY3Q70JA7 882 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ADCK2Q7Z695 626 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PIM3Q86V86 326 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CPNE9Q8IYJ1 553 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ARL10Q8N8L6 244 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ANKLE1Q8NAG6 615 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 OR13C4Q8NGS5 318 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 RAB2BQ8WUD1 216 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 OTULINQ96BN8 352 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PPP1R14BQ96C90 147 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms