RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 CKBP12277 381 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC26A3P40879 764 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SUOXP51687 545 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TNK2Q07912 1038 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 APOFQ13790 326 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 UGT3A1Q6NUS8 523 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TRAF7Q6Q0C0 670 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 LGI2Q8N0V4 545 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 MDGA1Q8NFP4 955 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 OR4K2Q8NGD2 314 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 DIS3LQ8TF46 1054 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TUBGCP3Q96CW5 907 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 FEM1CQ96JP0 617 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ZNF597Q96LX8 424 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 GPATCH1Q9BRR8 931 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ZFYVE28Q9HCC9 887 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 THEGQ9P2T0 379 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ZNF225Q9UK10 706 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 H3BSA7 217 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SOCS2O14508 198 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TPST1O60507 370 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TLR5O60602 858 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 S100BP04271 92 aaPredicted RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 FGF1P05230 155 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 HGFP14210 728 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TACR2P21452 398 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 EEF1DP29692 281 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC7A1P30825 629 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 STT3AP46977 705 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ACADVLP49748 655 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 RPS24P62847 133 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 PARP15Q460N3 678 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SAMD4BQ5PRF9 694 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 MRNIPQ6NTE8 343 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC24A5Q71RS6 500 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 DHFR2Q86XF0 187 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 GABPB2Q8TAK5 448 aaPredicted RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 PPWD1Q96BP3 646 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TIMMDC1Q9NPL8 285 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TBC1D23Q9NUY8 699 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SUPT3HB4E1H0 165 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 OR1I1O60431 355 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 HLA-DPA1P20036 260 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 PCSK6P29122 969 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 STX1BP61266 288 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TRAP1Q12931 704 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 DUSP4Q13115 394 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 KANK2Q63ZY3 851 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM173Q86WV6 379 aaPredicted RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SPPL2CQ8IUH8 684 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 PIANPQ8IYJ0 282 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 GPR150Q8NGU9 434 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 VPS33AQ96AX1 596 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 SPON2Q9BUD6 331 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 DUS2Q9NX74 493 aaKnown RBP10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
CLSTN1-203ENST00000435891 ARHGEF37A1IGU5 675 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 MTMR11A4FU01 709 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 ECI2O75521 394 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 RHOBTB1O94844 696 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 FGF4P08620 206 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 BMP1P13497 986 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PSMC3P17980 439 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 OXTRP30559 389 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TUFMP49411 452 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 ENTPD1P49961 510 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SGSHP51688 502 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 CLCQ05315 142 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TMIGD2Q96BF3 282 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 ACOX2Q99424 681 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 GPR21Q99679 349 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 CENPOQ9BU64 300 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 EPB41L1Q9H4G0 881 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC52A3Q9NQ40 469 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TUBA8Q9NY65 449 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SLAMF8Q9P0V8 285 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SQORQ9Y6N5 450 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SAC3D1A6NKF1 404 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 OXSR1O95747 527 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PRLP01236 227 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SERPINF2P08697 491 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PRKAR2AP13861 404 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PHEXP78562 749 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 NUDT8Q8WV74 236 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TOP1MTQ969P6 601 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TLR8Q9NR97 1041 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 USP22Q9UPT9 525 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 AURKCQ9UQB9 309 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 ASPDHA6ND91 283 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 NPEPPSL1A6NEC2 478 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 AKAP10O43572 662 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 GNAO1P09471 354 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC6A2P23975 617 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms