RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR6F1Q8NGZ6 308 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 JPH3Q8WXH2 748 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NSMCE2Q96MF7 247 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 KCTD15Q96SI1 283 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LPIN3Q9BQK8 851 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 C1QTNF1Q9BXJ1 281 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 AMBRA1Q9C0C7 1298 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 DCSTAMPQ9H295 470 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 QTRT2Q9H974 415 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FAM118AQ9NWS6 357 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TEKT2Q9UIF3 430 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 USP2O75604 605 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 RBP1P09455 135 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 OR4D2P58180 307 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SNRPD2P62316 118 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TRAF3Q13114 568 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NAB1Q13506 487 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SNX17Q15036 470 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CDK10Q15131 360 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 UGT3A2Q3SY77 523 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FAM182BQ5T319 152 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NCBP2-AS2Q69YL0 99 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 BRSK2Q8IWQ3 736 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 DYNC2LI1Q8TCX1 351 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SYTL5Q8TDW5 730 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ASZ1Q8WWH4 475 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NDRG1Q92597 394 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NEDD4LQ96PU5 975 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FYTTD1Q96QD9 318 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LHX5Q9H2C1 402 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SP140LQ9H930 580 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ZBTB20Q9HC78 741 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FAM95CA0A1B0GW59 222 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CCDC154A6NI56 674 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 S100A9P06702 114 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 MAGEA12P43365 314 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ACADSBP45954 432 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SERPINH1P50454 418 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 BST2Q10589 180 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NPTX1Q15818 432 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SMN1Q16637 294 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 RBM48Q5RL73 367 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SVOPQ8N4V2 548 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FAM149B1Q96BN6 582 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF670Q9BS34 389 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NUAK2Q9H093 628 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 PCDH10Q9P2E7 1040 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 EIF3LQ9Y262 564 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 hCG_2039718K7EN88 272 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 RECQL5O94762 991 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CYBBP04839 570 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LCKP06239 509 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CD36P16671 472 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 AZGP1P25311 298 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ALDH3A2P51648 485 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 DIO3P55073 304 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 Q5BKY6 102 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TTC23Q5W5X9 447 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM192Q8IY95 271 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 PPM1MQ96MI6 270 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 KCNA7Q96RP8 456 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SLIRPQ9GZT3 109 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 FBXO8Q9NRD0 319 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ERVK13-1Q9NX77 482 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CPSF3Q9UKF6 684 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SNX8Q9Y5X2 465 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LRRC14BA6NHZ5 514 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 EFCAB9A8MZ26 197 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 GABARAPO95166 117 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ANGPTL1O95841 491 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ITGB3P05106 788 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LINC00032P0C843 101 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 POU6F2P78424 691 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CD83Q01151 205 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 MAP1SQ66K74 1059 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF438Q7Z4V0 828 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 GPR78Q96P69 363 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ATXN3LQ9H3M9 355 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 RNF167Q9H6Y7 350 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 UTS2RQ9UKP6 389 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 WBP11Q9Y2W2 641 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 H0YAE9 185 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LCP1P13796 627 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 HGFP14210 728 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CBLP22681 906 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 MLLT3P42568 568 aaPredicted RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ST13P50502 369 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CDONQ4KMG0 1287 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ERAP2Q6P179 960 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ARHGAP36Q6ZRI8 547 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 PIK3C3Q8NEB9 887 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 STON2Q8WXE9 905 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SYNDIG1Q9H7V2 258 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 NTN4Q9HB63 628 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CDHR5Q9HBB8 845 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 RASSF1Q9NS23 344 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms