RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 BTN3A1O00481 513 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 PRR35P0CG20 571 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 HGFP14210 728 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 IDO1P14902 403 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 RPL17P18621 184 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 OR1D2P34982 312 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 MRPL19P49406 292 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 CDKN1CP49918 316 aaPredicted RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 ARF5P84085 180 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 PABPC1LQ4VXU2 614 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 CTSL3PQ5NE16 218 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 EFL1Q7Z2Z2 1120 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 GALNT15Q8N3T1 639 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 SLCO4A1Q96BD0 722 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 MUC3BQ9H195 1237 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 SEMA4BQ9NPR2 832 aaPredicted RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 TRPM5Q9NZQ8 1165 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 MAP10Q9P2G4 905 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TRMT6Q9UJA5 497 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 PCTPQ9UKL6 214 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TMCO1Q9UM00 188 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 BTRCQ9Y297 605 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 H7C0S8 307 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 ANGPT2O15123 496 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TMCC1O94876 653 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 ZNF26P17031 533 aaPredicted RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 CLCN4P51793 760 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TRAF2Q12933 501 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 MAP7D1Q3KQU3 841 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 USP41Q3LFD5 358 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 AARS2Q5JTZ9 985 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 RNF219Q5W0B1 726 aaPredicted RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 ZNF783Q6ZMS7 281 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 DHFR2Q86XF0 187 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 AHI1Q8N157 1196 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TTC30BQ8N4P2 665 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 MINDY1Q8N5J2 469 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 CD200R1Q8TD46 325 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 KCNJ9Q92806 393 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.45■□□□□ 0.546e-6■□□□□ 9.8
CLK1-205ENST00000434813 MYRFLQ96LU7 910 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 SLC30A3Q99726 388 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 CRISPLD2Q9H0B8 497 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 GKN1Q9NS71 199 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 GALPQ9UBC7 116 aa18.45■□□□□ 0.54
CLK1-205ENST00000434813 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
CLK1-205ENST00000434813 FXYD1O00168 92 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 NIPSNAP2O75323 286 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CRCPO75575 148 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 STAMBPO95630 424 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 MLYCDO95822 493 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CD160O95971 181 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 LINC00032P0C843 101 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 ADARP55265 1226 aaKnown RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 NME5P56597 212 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CDKL1Q00532 357 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 FOXM1Q08050 763 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 XKR7Q5GH72 579 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CYP2R1Q6VVX0 501 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 HERC6Q8IVU3 1022 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 RNF168Q8IYW5 571 aaPredicted RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 ZFAND2BQ8WV99 257 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 EME1Q96AY2 570 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 EFHD1Q9BUP0 239 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 EPB41L1Q9H4G0 881 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 ATP11BQ9Y2G3 1177 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 COMMD10Q9Y6G5 202 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 NME4O00746 187 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 STX7O15400 261 aaKnown RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 OR1I1O60431 355 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 SEC24AO95486 1093 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 ESRRBO95718 433 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CNPY1Q3B7I2 92 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 VPS26BQ4G0F5 336 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 NCEH1Q6PIU2 408 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 SPATA19Q7Z5L4 167 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 GALNT4Q8N4A0 578 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 EFHBQ8N7U6 833 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 SIDT2Q8NBJ9 832 aaKnown RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 OR2T34Q8NGX1 318 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 OR2T3Q8NH03 318 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 TSPEARQ8WU66 669 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 LRTOMTQ8WZ04 291 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 NCSTNQ92542 709 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CNBD2Q96M20 576 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 KLF16Q9BXK1 252 aaPredicted RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 SLC2A11Q9BYW1 496 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 ZNF696Q9H7X3 374 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 SLC52A3Q9NQ40 469 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 PLK2Q9NYY3 685 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 HSFX1Q9UBD0 423 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 STOML2Q9UJZ1 356 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 CNOT6Q9ULM6 557 aaKnown RBP18.44■□□□□ 0.54
CLK1-205ENST00000434813 GPR45Q9Y5Y3 372 aa18.44■□□□□ 0.54
CLK1-205ENST00000434813 SMIM31A0A1B0GVY4 71 aa18.43■□□□□ 0.54
CLK1-205ENST00000434813 TSPAN3O60637 253 aa18.43■□□□□ 0.54
CLK1-205ENST00000434813 TNFAIP8O95379 198 aa18.43■□□□□ 0.54
CLK1-205ENST00000434813 C1RP00736 705 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms