RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TRIM15Q9C019 465 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 WDR13Q9H1Z4 485 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 FGF22Q9HCT0 170 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 CACNG5Q9UF02 275 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 PCDHGB3Q9Y5G1 929 aa3.4□□□□□ -1.87
PTPN4-205ENST00000433888 PRAG1Q86YV5 1406 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 TEX13CA0A0J9YWL9 993 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 FAM90A26D6RGX4 464 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 LDLRAD4O15165 306 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 EIF5BO60841 1220 aaKnown RBP3.39□□□□□ -1.87
PTPN4-205ENST00000433888 SORBS2O94875 1100 aaKnown RBP3.39□□□□□ -1.87
PTPN4-205ENST00000433888 CAVIN2O95810 425 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 COX7A2P14406 83 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 CDAP32320 146 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 GNAQP50148 359 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 IRX6P78412 446 aaPredicted RBP3.39□□□□□ -1.87
PTPN4-205ENST00000433888 COG7P83436 770 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 UBE3AQ05086 875 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 SLC9B1Q4ZJI4 515 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 C6orf141Q5SZD1 244 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 FAAP20Q6NZ36 180 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 PLEKHM3Q6ZWE6 761 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 GPR180Q86V85 440 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 ZCCHC10Q8TBK6 192 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 NOC3LQ8WTT2 800 aaKnown RBP3.39□□□□□ -1.87
PTPN4-205ENST00000433888 FUZQ9BT04 418 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 LRMDAQ9H2I8 198 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 RPS10P5Q9NQ39 176 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 SLC7A10Q9NS82 523 aa3.39□□□□□ -1.87
PTPN4-205ENST00000433888 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 OR5K3A6NET4 321 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 H7C423 109 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 KCNN4O15554 427 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 WISP2O76076 250 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 PDE9AO76083 593 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 CEACAM1P13688 526 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 MAP2K2P36507 400 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 UBA7P41226 1012 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 TRAPPC10P48553 1259 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 CSRP3P50461 194 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 MRPS5P82675 430 aaKnown RBP3.38□□□□□ -1.87
PTPN4-205ENST00000433888 FGFBP1Q14512 234 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 ALG11Q2TAA5 492 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 COL28A1Q2UY09 1125 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 KRTCAP3Q53RY4 240 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 LCN10Q6JVE6 187 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 PLXDC2Q6UX71 529 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 CACNA2D4Q7Z3S7 1137 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 DDHD1Q8NEL9 900 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 ZBTB10Q96DT7 871 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 ABHD8Q96I13 439 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 ACOX2Q99424 681 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 EIF2AK1Q9BQI3 630 aaKnown RBP3.38□□□□□ -1.87
PTPN4-205ENST00000433888 BICC1Q9H694 974 aaKnown RBP3.38□□□□□ -1.87
PTPN4-205ENST00000433888 ZBTB20Q9HC78 741 aaPredicted RBP3.38□□□□□ -1.87
PTPN4-205ENST00000433888 BARHL2Q9NY43 387 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 KLHL9Q9P2J3 617 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
PTPN4-205ENST00000433888 SH2B2O14492 632 aaPredicted RBP3.37□□□□□ -1.87
PTPN4-205ENST00000433888 SLC22A2O15244 555 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 ZFAND5O76080 213 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 MSH3P20585 1137 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 ELF1P32519 619 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 FOXD4Q12950 439 aaPredicted RBP3.37□□□□□ -1.87
PTPN4-205ENST00000433888 ACVR2BQ13705 512 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 TUBB2AQ13885 445 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 MYLK3Q32MK0 819 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 KIAA1644Q3SXP7 199 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 ZNF790Q6PG37 636 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 Q75L30 129 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 DPPA4Q7L190 304 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 RRM2BQ7LG56 351 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 FAM222BQ8WU58 562 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 CCT6BQ92526 530 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 IGSF8Q969P0 613 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 PHF21AQ96BD5 680 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 MOCOSQ96EN8 888 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 RPS6KC1Q96S38 1066 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 TUBB2BQ9BVA1 445 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 BRF2Q9HAW0 419 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 RIC8AQ9NPQ8 531 aa3.37□□□□□ -1.87
PTPN4-205ENST00000433888 A0A0G2JNG1 304 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 A6NL46 340 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 DUXAA6NLW8 204 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 ANKRD28O15084 1053 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 SEC31AO94979 1220 aaKnown RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 DPEP1P16444 411 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 HOXA13P31271 388 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MLLT10P55197 1068 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MBTD1Q05BQ5 628 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 BIRC2Q13490 618 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 CAMK1Q14012 370 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 DRAP1Q14919 205 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 KIR2DS5Q14953 304 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 ZNF239Q16600 458 aaKnown RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 TCTE1Q5JU00 501 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms