RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 INAVAQ3KP66 663 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 AARS2Q5JTZ9 985 aaKnown RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 ZNF470Q6ECI4 717 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 AFTPHQ6ULP2 937 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 KYAT3Q6YP21 454 aaKnown RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 TRIM48Q8IWZ4 208 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 SUMF1Q8NBK3 374 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 OR4L1Q8NH43 312 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 RHBDD1Q8TEB9 315 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 BMFQ96LC9 184 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 COQ10AQ96MF6 247 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 ZNF778Q96MU6 729 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 ELF4Q99607 663 aaPredicted RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 FRMD8Q9BZ67 464 aaPredicted RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 SPASTQ9UBP0 616 aa6.96□□□□□ -1.29
CDC7-203ENST00000428239 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.29
CDC7-203ENST00000428239 CNOT1A5YKK6 2376 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 TMEM202A6NGA9 273 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 SMAPO00193 183 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 AGRPO00253 132 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 VILLO15195 856 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 GOT2P00505 430 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 MYCLP1P12525 358 aaPredicted RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 SRP54P61011 504 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 YPEL5P62699 121 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 BOP1Q14137 746 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 DEFB133Q30KQ1 61 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 HSP90AA5PQ58FG0 334 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 GPRC6AQ5T6X5 926 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 KCTD11Q693B1 232 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 DENND5AQ6IQ26 1287 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 PHACTR4Q8IZ21 702 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 TTC30BQ8N4P2 665 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 TRAM1L1Q8N609 369 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 NAT8LQ8N9F0 302 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 TP53I13Q8NBR0 393 aaPredicted RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDC7-203ENST00000428239 FBXO36Q8NEA4 188 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 CDKL2Q92772 493 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 FUBP1Q96AE4 644 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 PDXPQ96GD0 296 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 GORASP1Q9BQQ3 440 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 LGR4Q9BXB1 951 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 IARS2Q9NSE4 1012 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 WHRNQ9P202 907 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 ZFATQ9P243 1243 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 NFU1Q9UMS0 254 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 KCNK6Q9Y257 313 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 MAGEB16A2A368 324 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 RGSL1A5PLK6 1076 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 PABPN1LA6NDY0 278 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 GDF9O60383 454 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 SUN1O94901 812 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 ARSDP51689 593 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 CACNG1Q06432 222 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 GLE1Q53GS7 698 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 TMEM220Q6QAJ8 160 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 SNX20Q7Z614 316 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 SERPINA9Q86WD7 417 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 DCP2Q8IU60 420 aaKnown RBP6.96□□□□□ -1.3
CDC7-203ENST00000428239 MMGT1Q8N4V1 131 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 OXR1Q8N573 874 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 PNPLA1Q8N8W4 532 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 MCUQ8NE86 351 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 NELL1Q92832 810 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 ULK4Q96C45 1275 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 SGF29Q96ES7 293 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 PLEKHG4BQ96PX9 1271 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 LYSMD1Q96S90 227 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 NAT9Q9BTE0 207 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 IL21RQ9HBE5 538 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 FGF22Q9HCT0 170 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 CRYL1Q9Y2S2 319 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 PI4KAP42356 2102 aa6.96□□□□□ -1.3
CDC7-203ENST00000428239 CPED1A4D0V7 1026 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 CD3EAPO15446 510 aaKnown RBP6.95□□□□□ -1.3
CDC7-203ENST00000428239 GRID2O43424 1007 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 LDB2O43679 373 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 ACSL3O95573 720 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 WNT1P04628 370 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 PRSS56P0CW18 603 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 MLNP12872 115 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 ZNF7P17097 686 aaPredicted RBP6.95□□□□□ -1.3
CDC7-203ENST00000428239 PGAM1P18669 254 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 CHRM3P20309 590 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 SLC12A2P55011 1212 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 NFATC2Q13469 925 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 TRADDQ15628 312 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 CSRP2Q16527 193 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 LDLRAP1Q5SW96 308 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 NEPROQ6NW34 567 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 MACC1Q6ZN28 852 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 TECPR1Q7Z6L1 1165 aa6.95□□□□□ -1.3
CDC7-203ENST00000428239 RAVER1Q8IY67 606 aaKnown RBP6.95□□□□□ -1.3
CDC7-203ENST00000428239 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
CDC7-203ENST00000428239 PELI3Q8N2H9 469 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms