RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 NLRC4Q9NPP4 1024 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 FSCN3Q9NQT6 498 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 FAM207AQ9NSI2 230 aaPredicted RBP5.77□□□□□ -1.49
LINC00458-201ENST00000423442 ABCB8Q9NUT2 735 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 SEPT11Q9NVA2 429 aaKnown RBP5.77□□□□□ -1.49
LINC00458-201ENST00000423442 ASNSD1Q9NWL6 643 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 DDIT4Q9NX09 232 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC00458-201ENST00000423442 NCKAP1Q9Y2A7 1128 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 STON1Q9Y6Q2 735 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 PLXNB3Q9ULL4 1909 aa5.77□□□□□ -1.49
LINC00458-201ENST00000423442 GON4LQ3T8J9 2241 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 KIAA1549LQ6ZVL6 1849 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 TNRC6BQ9UPQ9 1833 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GOLGA6L7A0A1B0GV03 622 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 WASH3PC4AMC7 463 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PRRT4C9JH25 899 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GOLGA6L19H0YKK7 550 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 M0QYT0 321 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PAPSS1O43252 624 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GRAP2O75791 330 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 C1QL1O75973 258 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GFPT2O94808 682 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 DLDP09622 509 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GNSP15586 552 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ENGP17813 658 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 TNFAIP3P21580 790 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SOX5P35711 763 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 MATKP42679 507 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 NSFP46459 744 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 RPL34P49207 117 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 COPB1P53618 953 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ATXN3P54252 364 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GYS2P54840 703 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 APBA1Q02410 837 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 DEUP1Q05D60 604 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GFPT1Q06210 699 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SULT2A1Q06520 285 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 LMAN2Q12907 356 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SLC12A1Q13621 1099 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 TP53BP2Q13625 1128 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PLEKHG6Q3KR16 790 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ARL13BQ3SXY8 428 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ACCSLQ4AC99 568 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ANO6Q4KMQ2 910 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PDCD4Q53EL6 469 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 WDR45BQ5MNZ6 344 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 FAM102AQ5T9C2 384 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ANKS6Q68DC2 871 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PPP1R2P3Q6NXS1 205 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 KIAA1324Q6UXG2 1013 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 TRIM72Q6ZMU5 477 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 UBE2R2Q712K3 238 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 CHST9Q7L1S5 443 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 RASSF3Q86WH2 238 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 FAM217AQ8IXS0 508 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ZZZ3Q8IYH5 903 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 DEFB106AQ8N104 65 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 CFAP52Q8N1V2 620 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 WDTC1Q8N5D0 677 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 AOPEPQ8N6M6 819 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 CDYL2Q8N8U2 506 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF397Q8NF99 534 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 FIBINQ8TAL6 211 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 DQX1Q8TE96 717 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SIPA1Q96FS4 1042 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 PIWIL1Q96J94 861 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 COQ10AQ96MF6 247 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 CPXM1Q96SM3 734 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ACOX2Q99424 681 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GABRG3Q99928 467 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 NUP58Q9BVL2 599 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SIX2Q9NPC8 291 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ZDHHC4Q9NPG8 344 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 ACP6Q9NPH0 428 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 TMEM74BQ9NUR3 256 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 THAP10Q9P2Z0 257 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 LIMA1Q9UHB6 759 aaKnown RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 EVLQ9UI08 416 aaPredicted RBP5.76□□□□□ -1.49
LINC00458-201ENST00000423442 GGA2Q9UJY4 613 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 STOML2Q9UJZ1 356 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 SHROOM3Q8TF72 1996 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 CACNA1EQ15878 2313 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 KALRNO60229 2985 aa5.76□□□□□ -1.49
LINC00458-201ENST00000423442 F8VZ95 297 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 GOLGA8SH3BPF8 625 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 SRGAP2O75044 1071 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 SEC24DO94855 1032 aaPredicted RBP5.75□□□□□ -1.49
LINC00458-201ENST00000423442 IGLV3-27P01718 113 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 DNTTP04053 509 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 CFIP05156 583 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 FYNP06241 537 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 TPM3P06753 285 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 HKR1P10072 659 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 PLA2G2AP14555 144 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 PDGFRAP16234 1089 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 GABRG2P18507 467 aa5.75□□□□□ -1.49
LINC00458-201ENST00000423442 P2RY2P41231 377 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms