RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 FAM219BQ5XKK7 198 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 UGT3A1Q6NUS8 523 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 TTC16Q8NEE8 873 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 EEF1AKMT1Q8WVE0 214 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 C19orf43Q9BQ61 176 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 LRRC3Q9BY71 257 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 ZBP1Q9H171 429 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 SARDHQ9UL12 918 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 E5RI56 91 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 FBP2O00757 339 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 PIP5K1BO14986 540 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 ALPIP09923 528 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 STX1BP61266 288 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 PSME3P61289 254 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 MRPS35P82673 323 aaKnown RBP13.68□□□□□ -0.22
CDCA3-202ENST00000422785 CDC16Q13042 620 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 MPPE1Q53F39 396 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 REP15Q6BDI9 236 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 TMC8Q8IU68 726 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 BBS7Q8IWZ6 715 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCA3-202ENST00000422785 LINGO1Q96FE5 620 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 YME1L1Q96TA2 773 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 FBRSL1Q9HCM7 1045 aaKnown RBP13.68□□□□□ -0.22
CDCA3-202ENST00000422785 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 PCDHGA7Q9Y5G6 932 aa13.68□□□□□ -0.22
CDCA3-202ENST00000422785 HTRA2O43464 458 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 TIMP1P01033 207 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 LRG1P02750 347 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 ALDOCP09972 364 aaKnown RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 CTSAP10619 480 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 ITGB8P26012 769 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 CLCN7P51798 805 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 BCL2L1Q07817 233 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 METTL3Q86U44 580 aaKnown RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 ZNF483Q8TF39 744 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 SLC24A3Q9HC58 644 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 SEMA4BQ9NPR2 832 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 MRPL40Q9NQ50 206 aaKnown RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 KIAA1522Q9P206 1035 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 PCDHB1Q9Y5F3 818 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 DENND4CQ5VZ89 1909 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 TRIM38O00635 465 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 PRMT5O14744 637 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 BCAS2O75934 225 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 FGF18O76093 207 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 GPX3P22352 226 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 MS4A2Q01362 244 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 LMAN2Q12907 356 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 GPSM1Q86YR5 675 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 OR6K2Q8NGY2 324 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 FIBINQ8TAL6 211 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 GRIN3AQ8TCU5 1115 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 PDLIM5Q96HC4 596 aaKnown RBP13.67□□□□□ -0.22
CDCA3-202ENST00000422785 KCNA7Q96RP8 456 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 TUBB1Q9H4B7 451 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 PSMD13Q9UNM6 376 aa13.67□□□□□ -0.22
CDCA3-202ENST00000422785 TRAV19A0A0A6YYK7 116 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 A0A0J9YYE9 177 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
CDCA3-202ENST00000422785 NRP2O60462 931 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 SOCS5O75159 536 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 VPS4BO75351 444 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 MLYCDO95822 493 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 TRBC1P01850 177 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 CA8P35219 290 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 DDIASQ8IXT1 998 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 CPNE9Q8IYJ1 553 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 ABCB8Q9NUT2 735 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PCTPQ9UKL6 214 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 DHRS7Q9Y394 339 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 ACOT8O14734 319 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 GPR39O43194 453 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDCA3-202ENST00000422785 MSX2P35548 267 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-202ENST00000422785 AGTR2P50052 363 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 HK3P52790 923 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PAOXQ6QHF9 649 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PDSS2Q86YH6 399 aa13.66□□□□□ -0.22
CDCA3-202ENST00000422785 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms