RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 VPS35Q96QK1 796 aa13.14□□□□□ -0.31
CALD1-205ENST00000422748 GAD1Q99259 594 aa13.14□□□□□ -0.31
CALD1-205ENST00000422748 APOL2Q9BQE5 337 aa13.14□□□□□ -0.31
CALD1-205ENST00000422748 EML4Q9HC35 981 aaKnown RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 WDR6Q9NNW5 1121 aaKnown RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 STMN3Q9NZ72 180 aa13.14□□□□□ -0.31
CALD1-205ENST00000422748 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 MN1Q10571 1320 aaPredicted RBP13.14□□□□□ -0.31
CALD1-205ENST00000422748 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 AP3D1O14617 1153 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 AHSGP02765 367 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 TPH1P17752 444 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 ALOX12P18054 663 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 IMPDH1P20839 514 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 HRH2P25021 359 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 PSMB9P28065 219 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 ACOX1Q15067 660 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 GPR162Q16538 588 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 FBXL12Q9NXK8 326 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 HOXC6P09630 235 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 SIP14410 1827 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 FMO4P31512 558 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 RAB10P61026 200 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 TOMM20Q15388 145 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 CRY1Q16526 586 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 DUSP7Q16829 419 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 FAM83EQ2M2I3 478 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 Q5BKY6 102 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 MCOLN3Q8TDD5 553 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.313e-7■■■□□ 14.6
CALD1-205ENST00000422748 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 ST6GAL2Q96JF0 529 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 TMEM74Q96NL1 305 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
CALD1-205ENST00000422748 BCO2Q9BYV7 579 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 MUC13Q9H3R2 512 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 SLA2Q9H6Q3 261 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 AKTIPQ9H8T0 292 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 NPAP1Q9NZP6 1156 aa13.13□□□□□ -0.31
CALD1-205ENST00000422748 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 A0A0G2JMP0 313 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 ARHGAP33O14559 1287 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 UBFD1O14562 309 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 ZW10O43264 779 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CD4P01730 458 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 MSL3P1P0C860 447 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CES1P23141 567 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CD6P30203 668 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 RRM2P31350 389 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 ISL1P61371 349 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 GRM1Q13255 1194 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CCDC185Q8N715 623 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 ZHX1-C8orf76Q96EF9 292 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 C19orf60Q96EN9 201 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 REXO4Q9GZR2 422 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 C6orf62Q9GZU0 229 aaPredicted RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 PTGDR2Q9Y5Y4 395 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 A8MT66 165 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 KCNK1O00180 336 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 OGTO15294 1046 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CILPO75339 1184 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 RAD17O75943 681 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 ICAM1P05362 532 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 STMN1P16949 149 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 GRIK1P39086 918 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 PTGER2P43116 358 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 NFYCQ13952 458 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 ZNF404Q494X3 552 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 GLRX5Q86SX6 157 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 PSTKQ8IV42 348 aaKnown RBP13.12□□□□□ -0.31
CALD1-205ENST00000422748 TP53INP2Q8IXH6 220 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 UBQLNLQ8IYU4 475 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 CPXCR1Q8N123 301 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
CALD1-205ENST00000422748 SVIPQ8NHG7 77 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms