RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 PPIL1Q9Y3C6 166 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 MSRB2Q9Y3D2 182 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 NEUROG3Q9Y4Z2 214 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 OR1A2Q9Y585 309 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 PCDHGA1Q9Y5H4 931 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 NCOR2Q9Y618 2525 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 DOCK9Q9BZ29 2069 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 FRYLO94915 3013 aa7.56□□□□□ -1.2
AC012560.1-202ENST00000421324 hCG_1818297A0A087WSY0 165 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 A0A0J9YYE9 177 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 FAM95CA0A1B0GW59 222 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 MACROD2A1Z1Q3 448 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 FAM221BA6H8Z2 402 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 GOLGA6CA6NDK9 693 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 GOLGA6BA6NDN3 693 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 NPIPB15A6NHN6 443 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 MIF4GDA9UHW6 222 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 HACD1B0YJ81 288 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 K7ESM1 405 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TPP1O14773 563 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 NRDCO43847 1150 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TNFP01375 233 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TRBC1P01850 177 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ANXA6P08133 673 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 HOXC4P09017 264 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ALPIP09923 528 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 GOLGA6DP0CG33 693 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TSHRP16473 764 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ZNF30P17039 623 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CTNNA2P26232 953 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CTNNA1P35221 906 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TRIM23P36406 574 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ETV3P41162 512 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TNNT3P45378 269 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 MARCKSL1P49006 195 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 HK3P52790 923 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 SRP54P61011 504 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 E2F1Q01094 437 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ZBTB17Q13105 803 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ILKQ13418 452 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 NFATC4Q14934 902 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ELOCQ15369 112 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CNGA3Q16281 694 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TEX44Q53QW1 395 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TPRG1LQ5T0D9 272 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CRTC1Q6UUV9 634 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 Q6ZVL8 140 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 BBS12Q6ZW61 710 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 B4GALNT4Q76KP1 1039 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 PID1Q7Z2X4 250 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 KDELC2Q7Z4H8 507 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 HSD11B1LQ7Z5J1 315 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TMEM139Q8IV31 216 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 FSTL5Q8N475 847 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 RNF10Q8N5U6 811 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 PLA2G15Q8NCC3 412 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 ZNF548Q8NEK5 533 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 LPCAT1Q8NF37 534 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 OR56A4Q8NGH8 313 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CCHCR1Q8TD31 782 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 KRT35Q92764 455 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TSACCQ96A04 125 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 NUS1Q96E22 293 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 IMP4Q96G21 291 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TBATAQ96M53 351 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 WDR92Q96MX6 357 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 OLFM3Q96PB7 478 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 RBM15Q96T37 977 aaKnown RBP eCLIP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 VAT1Q99536 393 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 MLPHQ9BV36 600 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 SLC25A51Q9H1U9 297 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 CCDC86Q9H6F5 360 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 WDR26Q9H7D7 661 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 USP29Q9HBJ7 922 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 GLOD4Q9HC38 313 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 PHPT1Q9NRX4 125 aaPredicted RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 GOLGA6AQ9NYA3 693 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 NCKIPSDQ9NZQ3 722 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 KLQ9UEF7 1012 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 APOBEC3BQ9UH17 382 aaKnown RBP7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 WASF3Q9UPY6 502 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 EFR3BQ9Y2G0 817 aa7.55□□□□□ -1.2
AC012560.1-202ENST00000421324 TMEM131Q92545 1883 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 ANKRD66B4E2M5 251 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 LMO7DNF2Z398 122 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 H7C0C1 242 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 APOC4-APOC2K7ER74 178 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 TNFRSF10CO14798 259 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 YY2O15391 372 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 KRT86O43790 486 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 RFPL3O75679 317 aa7.54□□□□□ -1.2
AC012560.1-202ENST00000421324 STK10O94804 968 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms