RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PDAP1Q13442 181 aaKnown RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 CCDC85BQ15834 202 aaPredicted RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 FNDC3BQ53EP0 1204 aaKnown RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 SUSD6Q92537 303 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 KCNJ9Q92806 393 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 PBXIP1Q96AQ6 731 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 MYLK2Q9H1R3 596 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 CCDC68Q9H2F9 335 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 ACSS2Q9NR19 701 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 MARCOQ9UEW3 520 aaPredicted RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 ZNF106Q9H2Y7 1883 aaKnown RBP20.8■□□□□ 0.92
GPC1-202ENST00000420138 A0A0G2JND7 137 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 TBC1D3BA6NDS4 549 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 NEMP2A6NFY4 417 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 C16orf96A6NNT2 1141 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 PRMT5O14744 637 aaPredicted RBP20.8■□□□□ 0.92
GPC1-202ENST00000420138 RBP1P09455 135 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 ACRV1P26436 265 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 VIPR1P32241 457 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 EIF2DP41214 584 aaKnown RBP20.8■□□□□ 0.92
GPC1-202ENST00000420138 SKIV2L2P42285 1042 aaKnown RBP20.8■□□□□ 0.92
GPC1-202ENST00000420138 RALGDSQ12967 914 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 POM121L1PQ3SYA9 428 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 GPR33Q49SQ1 333 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 PARS2Q7L3T8 475 aaKnown RBP20.8■□□□□ 0.92
GPC1-202ENST00000420138 CD200R1Q8TD46 325 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.8■□□□□ 0.92
GPC1-202ENST00000420138 PLEKHG4BQ96PX9 1271 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 FAM129BQ96TA1 746 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 TMEM120AQ9BXJ8 343 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 ALG9Q9H6U8 611 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 IKZF3Q9UKT9 509 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 PPM1HQ9ULR3 514 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 DNAJC16Q9Y2G8 782 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 COMMD10Q9Y6G5 202 aa20.8■□□□□ 0.92
GPC1-202ENST00000420138 EDDM13A0A1B0GTR0 161 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 IQCF5A8MTL0 148 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 TMEM114B3SHH9 223 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 HGSO14964 777 aaPredicted RBP20.79■□□□□ 0.92
GPC1-202ENST00000420138 H2AFYO75367 372 aaKnown RBP20.79■□□□□ 0.92
GPC1-202ENST00000420138 TSPAN12O95859 305 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 RPS3P23396 243 aaKnown RBP eCLIP20.79■□□□□ 0.92
GPC1-202ENST00000420138 ATP5F1P24539 256 aaPredicted RBP20.79■□□□□ 0.92
GPC1-202ENST00000420138 PRKAA2P54646 552 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 NAGLUP54802 743 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 KLC3Q6P597 504 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 MTSS1LQ765P7 747 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 HSD11B1LQ7Z5J1 315 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 NAT14Q8WUY8 206 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 SYTL2Q9HCH5 934 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 FBRSL1Q9HCM7 1045 aaKnown RBP20.79■□□□□ 0.92
GPC1-202ENST00000420138 PRSS21Q9Y6M0 314 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
GPC1-202ENST00000420138 GOLGA8CPA6NN73 597 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ATP5HO75947 161 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 KAT7O95251 611 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 KITP10721 976 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ZNF30P17039 623 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 HNRNPH1P31943 449 aaKnown RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 IL12RB1P42701 662 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 CLCN7P51798 805 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ARFIP2P53365 341 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 DNAJB13P59910 316 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 SKIV2LQ15477 1246 aaKnown RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 TTC7BQ86TV6 843 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 NXPE1Q8N323 547 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 SIDT2Q8NBJ9 832 aaKnown RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 PIWIL2Q8TC59 973 aaKnown RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 ERP27Q96DN0 273 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 TRMT61BQ9BVS5 477 aaKnown RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 DRC3Q9H069 523 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 KLC4Q9NSK0 619 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 PNPOQ9NVS9 261 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 THAP10Q9P2Z0 257 aaPredicted RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 TMPRSS11EQ9UL52 423 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 PCDHB1Q9Y5F3 818 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 TICRRQ7Z2Z1 1910 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 A8MT66 165 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 SPINT1O43278 529 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 VPS26AO75436 327 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 CYP2A6P11509 494 aaPredicted RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 ZNF7P17097 686 aaPredicted RBP20.78■□□□□ 0.92
GPC1-202ENST00000420138 CCR10P46092 362 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 OR4D1Q15615 310 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ATP13A5Q4VNC0 1218 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 SPDYAQ5MJ70 313 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 LYPLAL1Q5VWZ2 237 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 DPPA4Q7L190 304 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 RBFAQ8N0V3 343 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 LSMEM2Q8N112 164 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 TMIEQ8NEW7 156 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ACOX2Q99424 681 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 DERL2Q9GZP9 239 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ZDHHC4Q9NPG8 344 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 TXLNGQ9NUQ3 528 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 KCNK4Q9NYG8 393 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 EPS15L1Q9UBC2 864 aa20.78■□□□□ 0.92
GPC1-202ENST00000420138 ZNF195O14628 629 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 PRNPP04156 253 aa20.77■□□□□ 0.92
GPC1-202ENST00000420138 PYGLP06737 847 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms