RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CCT3P49368 545 aaKnown RBP11.16□□□□□ -0.62
PTCH1-205ENST00000418258 SLC30A6Q6NXT4 461 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ABRAXAS1Q6UWZ7 409 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 OR5T3Q8NGG3 340 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 ACMSDQ8TDX5 336 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 STYXQ8WUJ0 223 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 FBXO5Q9UKT4 447 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
PTCH1-205ENST00000418258 SCGNO76038 276 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 UBXN7O94888 489 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CYB5AP00167 134 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 GNPDA1P46926 289 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 MAPK12P53778 367 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 NAE1Q13564 534 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 INAVAQ3KP66 663 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 PHF19Q5T6S3 580 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 TMEM164Q5U3C3 297 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 TCEAL6Q6IPX3 200 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 P2RY11Q96G91 374 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 GTPBP2Q9BX10 602 aaKnown RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CLDND1Q9NY35 253 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 XPR1Q9UBH6 696 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 TRIM3O75382 744 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 EPHA3P29320 983 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CAP1Q01518 475 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 ULK3Q6PHR2 472 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 FRRS1Q6ZNA5 592 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 BEND5Q7L4P6 421 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 UNC5BQ8IZJ1 945 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.622e-7■■■■■ 29
PTCH1-205ENST00000418258 GDF3Q9NR23 364 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 RAP2CQ9Y3L5 183 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 SERPINA1P01009 418 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 IFNA6P05013 189 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CASRP41180 1078 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 NRG1Q02297 640 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 C2orf27AQ580R0 203 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 LRRC38Q5VT99 294 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 HMGB4Q8WW32 186 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 BAP1Q92560 729 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 ANKZF1Q9H8Y5 726 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 A0A1W2PQ67 120 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CAPGP40121 348 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 MNDAP41218 407 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CACNG1Q06432 222 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 BROXQ5VW32 411 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 DUPD1Q68J44 220 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CIR1Q86X95 450 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 TP53INP1Q96A56 240 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CHMP1AQ9HD42 196 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 HEBP2Q9Y5Z4 205 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 LRIG2O94898 1065 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 SHBGP04278 402 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 PRR5P85299 388 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 FPGSQ05932 587 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 SRFBP1Q8NEF9 429 aaKnown RBP11.15□□□□□ -0.62
PTCH1-205ENST00000418258 COX4I2Q96KJ9 171 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 GPR20Q99678 358 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 PTPN18Q99952 460 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 CLEC4AQ9UMR7 237 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 U3KQV3 271 aa11.15□□□□□ -0.62
PTCH1-205ENST00000418258 MST1RQ04912 1400 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 hCG_1818297A0A087WSY0 165 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 PRMT5O14744 637 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 TM7SF2O76062 418 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 PRAMEF1O95521 474 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 PDHA2P29803 388 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 ACLYP53396 1101 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 PSME3P61289 254 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 RPP38P78345 283 aaKnown RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 SLC25A3Q00325 362 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 FMO1Q01740 532 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 PPIDQ08752 370 aaKnown RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 UAP1L1Q3KQV9 507 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 STRADAQ7RTN6 431 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 CERS5Q8N5B7 392 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 AMER2Q8N7J2 671 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 ARL14EPQ8N8R7 260 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 FNIP1Q8TF40 1166 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 GLTPD2A6NH11 291 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 CLDN9O95484 217 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 TCF4P15884 667 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 TIE1P35590 1138 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 ASMTP46597 345 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 CCR3P51677 355 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 LAPTM5Q13571 262 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 RELTQ969Z4 430 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 ZNF184Q99676 751 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-205ENST00000418258 MECRQ9BV79 373 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 TAPBPLQ9BX59 468 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 LRTM1Q9HBL6 345 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms