RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 GOLGA6L9A6NEM1 432 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 EPOPA6NHQ4 379 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 USP27XA6NNY8 438 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 BTNL10A8MVZ5 291 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 E5RJQ4 531 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PAPSS1O43252 624 aaPredicted RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 RGS10O43665 173 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 KRT86O43790 486 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PIAS2O75928 621 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SPDEFO95238 335 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SEC24AO95486 1093 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PEX11BO96011 259 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GLUD1P00367 558 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 C1RP00736 705 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ERBB2P04626 1255 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 RRM1P23921 792 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GABRB3P28472 473 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ELF1P32519 619 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ARHGAP25P42331 645 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GSCP56915 257 aaPredicted RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 RPL10AP62906 217 aaKnown RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 KIF5AQ12840 1032 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 MAMLD1Q13495 774 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ELF2Q15723 593 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PDCD2Q16342 344 aaPredicted RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 CYP4A22Q5TCH4 519 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ICE2Q659A1 982 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 OR6B2Q6IFH4 312 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PLEKHA7Q6IQ23 1121 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 CRTC1Q6UUV9 634 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PHLDB2Q86SQ0 1253 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ZDHHC17Q8IUH5 632 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SCN4BQ8IWT1 228 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SLC15A3Q8IY34 581 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SPARTQ8N0X7 666 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SIX6OS1Q8N1H7 587 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 C17orf53Q8N3J3 647 aaPredicted RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 FAM109AQ8N4B1 249 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GLIS1Q8NBF1 620 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GDPD5Q8WTR4 605 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ATRIPQ8WXE1 791 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 RFFLQ8WZ73 363 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 FAM136AQ96C01 138 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ZNF653Q96CK0 615 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 ARHGEF26Q96DR7 871 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SPATA17Q96L03 361 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 CEP295NLQ96MC4 621 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 SEPT5Q99719 369 aaPredicted RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 TSGA10Q9BZW7 698 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 AMBRA1Q9C0C7 1298 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 CYP4F11Q9HBI6 524 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 LRRC4Q9HBW1 653 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 LZTFL1Q9NQ48 299 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 PARVAQ9NVD7 372 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 WDR35Q9P2L0 1181 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 UVRAGQ9P2Y5 699 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 CNOT8Q9UFF9 292 aaKnown RBP6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 GUCA1BQ9UMX6 200 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 TFR2Q9UP52 801 aa6.05□□□□□ -1.44
NIFKP3-201ENST00000417799 NCANO14594 1321 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TCRBV5S1A1TA0A578 114 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SIGLEC16A6NMB1 481 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 GOLGA8SH3BPF8 625 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 PRRG1O14668 218 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SRGAP2O75044 1071 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SKAP2O75563 359 aaPredicted RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 CSPG5O95196 566 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 CLCN4P51793 760 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TKTL1P51854 596 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 MRPS5P82675 430 aaKnown RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 ADIGQ0VDE8 80 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 PLD1Q13393 1074 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TP53BP2Q13625 1128 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 PTCHD3Q3KNS1 767 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TUBB8Q3ZCM7 444 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SDHAF4Q5VUM1 108 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 PM20D1Q6GTS8 502 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 DNAJC24Q6P3W2 148 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 DENND5BQ6ZUT9 1274 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 FAM183BPQ6ZVS7 135 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 RTL10Q7L3V2 364 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 NUP93Q8N1F7 819 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SCML4Q8N228 414 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 RNF10Q8N5U6 811 aaKnown RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 SCAMP5Q8TAC9 235 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 ZNF564Q8TBZ8 553 aaPredicted RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 FUBP1Q96AE4 644 aaKnown RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 MRPL38Q96DV4 380 aaKnown RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 MCRS1Q96EZ8 462 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 HERPUD2Q9BSE4 406 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 NUP85Q9BW27 656 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TPSD1Q9BZJ3 242 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 ULBP1Q9BZM6 244 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 FBXO44Q9H4M3 255 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 PLEKHA4Q9H4M7 779 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 TLE6Q9H808 572 aa6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 MRPL47Q9HD33 250 aaKnown RBP6.04□□□□□ -1.44
NIFKP3-201ENST00000417799 CNGB3Q9NQW8 809 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms