RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NUDT22Q9BRQ3 303 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 OSBPL1AQ9BXW6 950 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 CDH19Q9H159 772 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 ATP13A3Q9H7F0 1226 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 KLQ9UEF7 1012 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 OR1A2Q9Y585 309 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 PCDHGA3Q9Y5H0 932 aa17.89■□□□□ 0.45
VCP-202ENST00000417448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
VCP-202ENST00000417448 A0A0U1RQS6 177 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 ZNF891A8MT65 544 aaPredicted RBP17.88■□□□□ 0.45
VCP-202ENST00000417448 APOC4-APOC2K7ER74 178 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 B4GAT1O43505 415 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 APOC2P02655 101 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 RBL1P28749 1068 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 PTPN7P35236 360 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 CETN2P41208 172 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 MLLT10P55197 1068 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 WSCD2Q2TBF2 565 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 ZNF569Q5MCW4 686 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 SLC35F6Q8N357 371 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 FAM46DQ8NEK8 389 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 ARRDC2Q8TBH0 407 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 CXorf40AQ8TE69 158 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 TAAR9Q96RI9 348 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 C1QTNF7Q9BXJ2 289 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 ATP8A1Q9Y2Q0 1164 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 B3GALT1Q9Y5Z6 326 aa17.88■□□□□ 0.45
VCP-202ENST00000417448 IGHV5-10-1A0A0J9YXX1 117 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 PRR19A6NJB7 356 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 B4DGG1 531 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 TRAFD1O14545 582 aaPredicted RBP17.87■□□□□ 0.45
VCP-202ENST00000417448 ZSCAN12O43309 604 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 CPNE6O95741 557 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 MMP2P08253 660 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 PDHA1P08559 390 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 PRKAR1AP10644 381 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 NR1D1P20393 614 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 XPAP23025 273 aaPredicted RBP17.87■□□□□ 0.45
VCP-202ENST00000417448 PTPN3P26045 913 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 SERPINA4P29622 427 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 CD86P42081 329 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 EIF3EP60228 445 aaKnown RBP17.87■□□□□ 0.45
VCP-202ENST00000417448 AP1S1P61966 158 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 IFI35P80217 286 aaPredicted RBP17.87■□□□□ 0.45
VCP-202ENST00000417448 WASHC5Q12768 1159 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 ARHGEF7Q14155 803 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 INPP5AQ14642 412 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 LRRC14Q15048 493 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 NOMO1Q15155 1222 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 KCTD19Q17RG1 926 aaPredicted RBP17.87■□□□□ 0.45
VCP-202ENST00000417448 CFAP58Q5T655 872 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 ATCAYQ86WG3 371 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 CACNA2D3Q8IZS8 1091 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 QKIQ96PU8 341 aaKnown RBP eCLIP17.87■□□□□ 0.45
VCP-202ENST00000417448 APOOQ9BUR5 198 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 PCDH12Q9NPG4 1184 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 UBP1Q9NZI7 540 aa17.87■□□□□ 0.45
VCP-202ENST00000417448 FBN2P35556 2912 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 MED13Q9UHV7 2174 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 K7EM74 188 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 NUDT21O43809 227 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 TJP3O95049 919 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 CTPS1P17812 591 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 HTR1BP28222 390 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 OAS2P29728 719 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 HSPA9P38646 679 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 OR1D5P58170 312 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 CDC20Q12834 499 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 UGP2Q16851 508 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 AMZ1Q400G9 498 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 LACTB2Q53H82 288 aaPredicted RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 DARS2Q6PI48 645 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 TAF8Q7Z7C8 310 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 PIM3Q86V86 326 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 SPATA22Q8NHS9 363 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 CCL4L1Q8NHW4 92 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 ATG4AQ8WYN0 398 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 OR1E3Q8WZA6 343 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 FATE1Q969F0 183 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 FUBP1Q96AE4 644 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 SLC45A3Q96JT2 553 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 CCDC74BQ96LY2 380 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 WDR92Q96MX6 357 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 ZNF641Q96N77 438 aaPredicted RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 TUBGCP5Q96RT8 1024 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 POLR1EQ9GZS1 481 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 MRPL40Q9NQ50 206 aaKnown RBP17.86■□□□□ 0.45
VCP-202ENST00000417448 DKK3Q9UBP4 350 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 CHKBQ9Y259 395 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 EFR3BQ9Y2G0 817 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 DGKBQ9Y6T7 804 aa17.86■□□□□ 0.45
VCP-202ENST00000417448 HGSO14964 777 aaPredicted RBP17.85■□□□□ 0.45
VCP-202ENST00000417448 RAD1O60671 282 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 TNFP01375 233 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 RBP3P10745 1247 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 CD68P34810 354 aaPredicted RBP17.85■□□□□ 0.45
VCP-202ENST00000417448 KLRB1Q12918 225 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 KLF1Q13351 362 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms