RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PPP1R15BQ5SWA1 713 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 IYDQ6PHW0 289 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 TP53INP2Q8IXH6 220 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 PGBD5Q8N414 524 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 SCAMP4Q969E2 229 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 SH3KBP1Q96B97 665 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 AP2M1Q96CW1 435 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 STAMBPL1Q96FJ0 436 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 SCRN2Q96FV2 425 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 COX14Q96I36 57 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 C9orf72Q96LT7 481 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 ZNF599Q96NL3 588 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 NUDCD1Q96RS6 583 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 AGAP2Q99490 1192 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 MGME1Q9BQP7 344 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 HERPUD2Q9BSE4 406 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 TBC1D10AQ9BXI6 508 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 TWSG1Q9GZX9 223 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 ABCG8Q9H221 673 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 EPB41L1Q9H4G0 881 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 CASS4Q9NQ75 786 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 FAM207AQ9NSI2 230 aaPredicted RBP9.46□□□□□ -0.9
RFFL-203ENST00000413582 OGFRQ9NZT2 677 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 KCND3Q9UK17 655 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 PHTF1Q9UMS5 762 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 AP4E1Q9UPM8 1137 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 KCNK6Q9Y257 313 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 FBN2P35556 2912 aa9.46□□□□□ -0.9
RFFL-203ENST00000413582 A0A1W2PQJ5 194 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PIPSLA2A3N6 862 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 EIF3CLB5ME19 914 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 INPP4BO15327 924 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 NDUFA10O95299 355 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PEX11BO96011 259 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 F3P13726 295 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 CTPS1P17812 591 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 CASP14P31944 242 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 HSPA9P38646 679 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 GARSP41250 739 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 PGDP52209 483 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 UBE2IP63279 158 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 MRPL49Q13405 166 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 ZNF235Q14590 738 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 CPZQ66K79 652 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 LRRC66Q68CR7 880 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 USP45Q70EL2 814 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 ZNF765Q7L2R6 523 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 LYSMD3Q7Z3D4 306 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 SLC9B2Q86UD5 537 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PLXDC1Q8IUK5 500 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 LZTR1Q8N653 840 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 CT55Q8WUE5 264 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 SMIM14Q96QK8 99 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 OR6C1Q96RD1 312 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PEBP4Q96S96 227 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 EIF3CQ99613 913 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 SNRNP25Q9BV90 132 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 BRD8Q9H0E9 1235 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 ACTL8Q9H568 366 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 DHX35Q9H5Z1 703 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 NOD2Q9HC29 1040 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 MLXIPLQ9NP71 852 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 VPS18Q9P253 973 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 CNOT8Q9UFF9 292 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PPIL1Q9Y3C6 166 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PRKAB1Q9Y478 270 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 PCDHGA9Q9Y5G4 932 aaKnown RBP9.45□□□□□ -0.9
RFFL-203ENST00000413582 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
RFFL-203ENST00000413582 KIR2DS5A0A0G2JLQ3 304 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 A0A0G2JNG1 304 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ANKRD62A6NC57 917 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 WIPF3A6NGB9 483 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 TCP11X1B4DZS4 312 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 C21orf140B9A014 251 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 KIR2DS3K7RE56 304 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 LDLRP01130 860 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ATP1A1P05023 1023 aaKnown RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 PYGLP06737 847 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ACP5P13686 325 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 SLC2A4P14672 509 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 TNFRSF8P28908 595 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 POLR2FP61218 127 aaKnown RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 MAXP61244 160 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 CHAF1BQ13112 559 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 DPYSQ14117 519 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 IL11RAQ14626 422 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 KIR2DS5Q14953 304 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ARMC12Q5T9G4 340 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 PAPD7Q5XG87 772 aaKnown RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 CYP4V2Q6ZWL3 525 aaPredicted RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 CHST15Q7LFX5 561 aaPredicted RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 NLRP8Q86W28 1048 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 RASGRP3Q8IV61 690 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 CNGA4Q8IV77 575 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 Q8NA96 180 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 AVL9Q8NBF6 648 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms