RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 BMP4P12644 408 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC2A4P14672 509 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TSHRP16473 764 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ARF4P18085 180 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 EIF2AK2P19525 551 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 S100PP25815 95 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CD40LGP29965 261 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 WNT5AP41221 380 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 QARSP47897 775 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 RGS19P49795 217 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 HNMTP50135 292 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 HAND2P61296 217 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TDRD12Q587J7 1177 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 DGKKQ5KSL6 1271 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ERICH5Q6P6B1 374 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CHSY3Q70JA7 882 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CYS1Q717R9 158 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 H2AFVQ71UI9 128 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TAC4Q86UU9 113 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 LYSMD2Q8IV50 215 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PRSS58Q8IYP2 241 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 UBQLNLQ8IYU4 475 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 NAGSQ8N159 534 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PDIK1LQ8N165 341 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PQLC1Q8N2U9 271 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PARP8Q8N3A8 854 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 FAM26EQ8N5C1 309 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 S100ZQ8WXG8 99 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 GPRASP2Q96D09 838 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 C19orf60Q96EN9 201 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CSF3RQ99062 836 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 SEMA6CQ9H3T2 930 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 FBXO6Q9NRD1 293 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 PNPLA3Q9NST1 481 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 BABAM2Q9NXR7 383 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PSMC3IPQ9P2W1 217 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 ASH2LQ9UBL3 628 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC39A10Q9ULF5 831 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 RGPD2P0DJD1 1756 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CNTNAP2Q9UHC6 1331 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 F8VP50 259 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 AKAP8O43823 692 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 H2AFYO75367 372 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 RHOBTB1O94844 696 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 APOL3O95236 402 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 KCNH1O95259 989 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PROCP04070 461 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CKMT1AP12532 417 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MLNP12872 115 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 HNRNPLP14866 589 aaKnown RBP eCLIP5.21□□□□□ -1.583e-6■■□□□ 11.8
HERC4-205ENST00000412272 CKMT2P17540 419 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 OSBPP22059 807 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PTBP1P26599 531 aaKnown RBP eCLIP5.21□□□□□ -1.581e-6■■□□□ 13.4
HERC4-205ENST00000412272 THBS2P35442 1172 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 RAD23AP54725 363 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TMBIM6P55061 237 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ARPP19P56211 112 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SPIRE1Q08AE8 756 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MTMR1Q13613 665 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 HIC1Q14526 733 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 AP5B1Q2VPB7 878 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 GDPD3Q7L5L3 318 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TRMT11Q7Z4G4 463 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 CCDC105Q8IYK2 499 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 THEM5Q8N1Q8 247 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CLRN3Q8NCR9 226 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TAS1R2Q8TE23 839 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC26A7Q8TE54 656 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 KLHL32Q96NJ5 620 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 GPR63Q9BZJ6 419 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 BTBD1Q9H0C5 482 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MRPL47Q9HD33 250 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 RGS18Q9NS28 235 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 FBXO28Q9NVF7 368 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TMLHEQ9NVH6 421 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MYH14Q7Z406 1995 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 ROBO3Q96MS0 1386 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 KIAA1551Q9HCM1 1747 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 TNRC6CQ9HCJ0 1690 aaKnown RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 A0A087WXM4 84 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 LOC102724428A0A0B4J2F2 783 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 KLRG2A4D1S0 409 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 A8MXE2 369 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 HSBP1L1C9JCN9 74 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 ANKRD63C9JTQ0 380 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 KIAA0355O15063 1070 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 HUS1O60921 280 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 EIF3GO75821 320 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERC4-205ENST00000412272 PRKD3O94806 890 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 CD36P16671 472 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 JUNBP17275 347 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 CCR1P32246 355 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 IL15P40933 162 aaPredicted RBP5.2□□□□□ -1.58
HERC4-205ENST00000412272 PIK3CBP42338 1070 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 GATMP50440 423 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 HK3P52790 923 aa5.2□□□□□ -1.58
HERC4-205ENST00000412272 SIK1P57059 783 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms