RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FRAT1Q92837 279 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 SMC6Q96SB8 1091 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 STRBPQ96SI9 672 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 MYOCQ99972 504 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAK16Q9BXY0 300 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 MRPL4Q9BYD3 311 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRORYQ9H606 182 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ISG20L2Q9H9L3 353 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 EML4Q9HC35 981 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GLOD4Q9HC38 313 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLAMF7Q9NQ25 335 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GDF3Q9NR23 364 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CCM2LQ9NUG4 571 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 C2orf42Q9NWW7 574 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM206AQ9NX38 181 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 LRP2BPQ9P2M1 347 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZBTB21Q9ULJ3 1066 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 EXO1Q9UQ84 846 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNAH8Q96JB1 4490 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRR14LQ5THK1 2151 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CRB1P82279 1406 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ESPL1Q14674 2120 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 TSPOAP1O95153 1857 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 LOC285556D6RIA3 1793 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CENPVL3A0A0U1RRI6 287 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRSS38A1L453 326 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HNRNPCL2B2RXH8 293 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 E7EQL1 145 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 RPL36A-HNRNPH2H7BZ11 118 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MYO1CO00159 1063 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 EEF2KO00418 725 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC22A1O15245 554 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SERPINI2O75830 405 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 APOL3O95236 402 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 DDAH2O95865 285 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HPRP00739 348 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZFYP08048 801 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ODC1P11926 461 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ATP1A3P13637 1013 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNA6P17658 529 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGFBP3P17936 291 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 RPS6KB1P23443 525 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CANXP27824 592 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 GNA15P30679 374 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXA13P31271 388 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXC9P31274 260 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 GNL1P36915 607 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 EIF4A3P38919 411 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAGEA3P43357 314 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAGEA6P43360 314 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC6A8P48029 635 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 BMXP51813 675 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 GYS2P54840 703 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZP4Q12836 540 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 PSG7Q13046 419 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC12A1Q13621 1099 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SNTB1Q13884 538 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 LRRC36Q1X8D7 754 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ANXA2RQ3ZCQ2 193 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CCDC178Q5BJE1 867 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 EFHC1Q5JVL4 640 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SIRPB2Q5JXA9 342 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CASC10Q5T4H9 136 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF684Q5T5D7 378 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 AGAP6Q5VW22 663 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM90A2PQ658T7 463 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 WDR59Q6PJI9 974 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC16A12Q6ZSM3 486 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MFSD6Q6ZSS7 791 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 TMEM26Q6ZUK4 368 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 TMUB2Q71RG4 321 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC47A2Q86VL8 602 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 CPOQ8IVL8 374 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC44A2Q8IWA5 706 aaPredicted RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 TTC5Q8N0Z6 440 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 FTMTQ8N4E7 242 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZCCHC9Q8N567 271 aaKnown RBP-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 C3orf20Q8ND61 904 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNAAF1Q8NEP3 725 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 KLHDC9Q8NEP7 349 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 PCDH19Q8TAB3 1148 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 POC1BQ8TC44 478 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HTRA1Q92743 480 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SEMA4DQ92854 862 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC45A3Q96JT2 553 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 AGAP4Q96P64 663 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPAG5Q96R06 1193 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRIB1Q96RU8 372 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAPKAP1Q9BPZ7 522 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC17A9Q9BYT1 436 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXD1Q9GZZ0 328 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SIK2Q9H0K1 926 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 XKR8Q9H6D3 395 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 AAMDCQ9H7C9 122 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 LINC00574Q9H8X3 128 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAP6D1Q9H9H5 199 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 GNB4Q9HAV0 340 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 FANCEQ9HB96 536 aa-1.59□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC52A3Q9NQ40 469 aa-1.59□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms