RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TNKS2Q9H2K2 1166 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 EFCAB1Q9HAE3 211 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 MID1IP1Q9NPA3 183 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 CCL26Q9Y258 94 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 INSL6Q9Y581 213 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 MYOFQ9NZM1 2061 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 NVLO15381 856 aaKnown RBP19.97■□□□□ 0.79
USP39-204ENST00000409766 IGSF6O95976 241 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 GLUD1P00367 558 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 CLCN7P51798 805 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 EML3Q32P44 896 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 TCHHL1Q5QJ38 904 aaPredicted RBP19.97■□□□□ 0.79
USP39-204ENST00000409766 LINGO1Q96FE5 620 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 C1QTNF3Q9BXJ4 246 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 EMILIN2Q9BXX0 1053 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 ATP13A3Q9H7F0 1226 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 S100A14Q9HCY8 104 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 PPM1HQ9ULR3 514 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 C1orf232A0A0U1RR37 186 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 CXorf51AA0A1B0GTR3 108 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 HIDE1A8MVS5 230 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 E5RI56 91 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 STX16-NPEPL1H3BU86 382 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 STX16O14662 325 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 PRMT5O14744 637 aaPredicted RBP19.96■□□□□ 0.79
USP39-204ENST00000409766 AZIN1O14977 448 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 CYBBP04839 570 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 HNF1BP35680 557 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 LBX1P52954 281 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 CLCQ05315 142 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 LCP2Q13094 533 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 PTK2BQ14289 1009 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 CMPK2Q5EBM0 449 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 KANK2Q63ZY3 851 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 CPNE9Q8IYJ1 553 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 PGAM4Q8N0Y7 254 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 OR2AP1Q8NGE2 309 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 TRPC4APQ8TEL6 797 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 DNAJC9Q8WXX5 260 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 JADE3Q92613 823 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 RPL10LQ96L21 214 aaKnown RBP19.96■□□□□ 0.79
USP39-204ENST00000409766 NDE1Q9NXR1 346 aa19.96■□□□□ 0.79
USP39-204ENST00000409766 ATP6AP2A0A1C7CYW4 349 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 IQCF5A8MTL0 148 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 GPC4O75487 556 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 ATP6AP2O75787 350 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 PRAMEF1O95521 474 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 RPS17P08708 135 aaKnown RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 SRCP12931 536 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 HLA-FP30511 346 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 CTSOP43234 321 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 FOXA1P55317 472 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 PITRM1Q5JRX3 1037 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 ANKS6Q68DC2 871 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 UGT3A1Q6NUS8 523 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 FAM151BQ6UXP7 276 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 GK5Q6ZS86 529 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 ZSWIM9Q86XI8 627 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.95■□□□□ 0.78
USP39-204ENST00000409766 PCDHB1Q9Y5F3 818 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 ANKRD12Q6UB98 2062 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 CAPN8A6NHC0 703 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 PSMD12O00232 456 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 CLDN7O95471 211 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 FGBP02675 491 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 CA5AP35218 305 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 STK19P49842 368 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 MUM1Q2TAK8 710 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 BNC2Q6ZN30 1099 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 SERPINA9Q86WD7 417 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 MRPL43Q8N983 215 aaKnown RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 RIN3Q8TB24 985 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 CCDC97Q96F63 343 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 CDRT15Q96T59 188 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 SERPINI1Q99574 410 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 TTC1Q99614 292 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 WDR41Q9HAD4 459 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 IL26Q9NPH9 171 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 CXXC1Q9P0U4 656 aaPredicted RBP19.95■□□□□ 0.78
USP39-204ENST00000409766 DHRS7Q9Y394 339 aa19.95■□□□□ 0.78
USP39-204ENST00000409766 A0A1B0GTL3 188 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 CSPG5O95196 566 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 ATP6V1C1P21283 382 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 SERPINA4P29622 427 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 HK3P52790 923 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 EPHA5P54756 1037 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 NFATC2Q13469 925 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 ART3Q13508 389 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 FASTKQ14296 549 aaKnown RBP19.94■□□□□ 0.78
USP39-204ENST00000409766 FBXO48Q5FWF7 155 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 PIGGQ5H8A4 983 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 TXNDC11Q6PKC3 985 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 SNX20Q7Z614 316 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 ADGRG6Q86SQ4 1221 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 TWIST2Q8WVJ9 160 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 PYDC1Q8WXC3 89 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 TCEAL4Q96EI5 215 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 PDLIM5Q96HC4 596 aaKnown RBP19.94■□□□□ 0.78
USP39-204ENST00000409766 NPAS2Q99743 824 aa19.94■□□□□ 0.78
USP39-204ENST00000409766 AKTIPQ9H8T0 292 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms