RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SLC30A3Q99726 388 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 MRPL46Q9H2W6 279 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ZNF395Q9H8N7 513 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 MID2Q9UJV3 735 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 OAS3Q9Y6K5 1087 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 IQCF5A8MTL0 148 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 C1QTNF3-AMACRE9PGA6 284 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 VPS26AO75436 327 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ELFN1P0C7U0 828 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ADRB3P13945 408 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 CD1DP15813 335 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ZNF7P17097 686 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PPARGP37231 505 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 DCDC1P59894 354 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 OCRLQ01968 901 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 OVGP1Q12889 678 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 STX3Q13277 289 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 LIPIQ6XZB0 460 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 Q6ZVL8 140 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 SIDT2Q8NBJ9 832 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 LKAAEAR1Q8TD35 194 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 CD200R1Q8TD46 325 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 KCNJ9Q92806 393 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 MRPL57Q9BQC6 102 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
GPNMB-203ENST00000409458 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 CLPBQ9H078 707 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 HEBP1Q9NRV9 189 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 PCDHB1Q9Y5F3 818 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 COMMD10Q9Y6G5 202 aa13.95□□□□□ -0.18
GPNMB-203ENST00000409458 H3BMM5 538 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 EGFP01133 1207 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SERPINE1P05121 402 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 RALBP11234 206 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 TFEBP19484 476 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 CD9P21926 228 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 DMTNQ08495 405 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 ACAP2Q15057 778 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 PON2Q15165 354 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SKIV2LQ15477 1246 aaKnown RBP13.94□□□□□ -0.18
GPNMB-203ENST00000409458 KLC3Q6P597 504 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 FBXL19Q6PCT2 694 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 TECPR1Q7Z6L1 1165 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SLC44A3Q8N4M1 653 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 OR6Y1Q8NGX8 325 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 PTERQ96BW5 349 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 C7orf26Q96N11 449 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 TTC1Q99614 292 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 ALG9Q9H6U8 611 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 DYRK4Q9NR20 520 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-203ENST00000409458 GNPTGQ9UJJ9 305 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 TMPRSS11EQ9UL52 423 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 PIAS3Q9Y6X2 628 aa13.94□□□□□ -0.18
GPNMB-203ENST00000409458 E5RI56 91 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 AREL1O15033 823 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ITM2AO43736 263 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ZBTB14O43829 449 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 DLX3O60479 287 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 LYPLA1O75608 230 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 PYGLP06737 847 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ASGR2P07307 311 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 CHRM3P20309 590 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ARRB2P32121 409 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 P2RY2P41231 377 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 LIG3P49916 1009 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 CLCN7P51798 805 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 PFKPQ01813 784 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 MLLT1Q03111 559 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ELP6Q0PNE2 266 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ITIH4Q14624 930 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 HENMT1Q5T8I9 393 aaKnown RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 IER5LQ5T953 404 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 PTRHD1Q6GMV3 140 aaKnown RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ATG14Q6ZNE5 492 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ERN2Q76MJ5 926 aaKnown RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 Q7L0L9 218 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 CACUL1Q86Y37 369 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 CLDN19Q8N6F1 224 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 TXNDC5Q8NBS9 432 aaKnown RBP13.93□□□□□ -0.18
GPNMB-203ENST00000409458 ULK4Q96C45 1275 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 NPHS2Q9NP85 383 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 TRPV5Q9NQA5 729 aa13.93□□□□□ -0.18
GPNMB-203ENST00000409458 SMOXQ9NWM0 555 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms