RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 WNT9AO14904 365 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 SSNA1O43805 119 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 IL12AP29459 219 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 COPAP53621 1224 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 AIF1P55008 147 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 DNAJC3Q13217 504 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 C1orf189Q5VU69 101 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 TTC27Q6P3X3 843 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MSANTD1Q6ZTZ1 278 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FAM183BPQ6ZVS7 135 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PLXDC1Q8IUK5 500 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MFSD6LQ8IWD5 586 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 SYNPOQ8N3V7 929 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 GIPC3Q8TF64 312 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 JPH3Q8WXH2 748 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 DLG3Q92796 817 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 RAB7BQ96AH8 199 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HAVCR1Q96D42 359 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HNRNPABQ99729 332 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 EBNA1BP2Q99848 306 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 IER2Q9BTL4 223 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FRMD8P1Q9BZ68 369 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF221Q9UK13 617 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FAM92AA1XBS5 289 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 C2CD4DB7Z1M9 353 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 H3BNH8 94 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MBTPS2O43462 519 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FCGR1AP12314 374 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 RHOQP17081 205 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 NTSP30990 170 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 OTX2P32243 289 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ZFP69Q49AA0 526 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 WASHC2DQ5SRD0 308 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CDC73Q6P1J9 531 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PCDH20Q8N6Y1 951 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FAM136AQ96C01 138 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 TBATAQ96M53 351 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 C12orf66Q96MD2 445 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 KCNN2Q9H2S1 579 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CRNNQ9UBG3 495 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MYRFQ9Y2G1 1151 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 POLR1DQ9Y2S0 133 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ZNF879B4DU55 563 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 GTPBP1O00178 669 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 SCGNO76038 276 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HEXBP07686 556 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 GRK6P43250 576 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 NRG3P56975 720 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 YBEYP58557 167 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 C1QBPQ07021 282 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CARTPTQ16568 116 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FAM187BQ17R55 369 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FAM83EQ2M2I3 478 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 LEXMQ3ZCV2 418 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CBWD6Q4V339 395 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HECTD2Q5U5R9 776 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 POC5Q8NA72 575 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PSMG2Q969U7 264 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 APOL2Q9BQE5 337 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 TTYH1Q9H313 450 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ACTR8Q9H981 624 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 WNT16Q9UBV4 365 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CD84Q9UIB8 345 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 TBX21Q9UL17 535 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CASZ1Q86V15 1759 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 A0A087WXM4 84 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 OR5K4A6NMS3 321 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 KCNU1A8MYU2 1149 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 E9PAM4 449 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PRAMEF26H0Y7S4 382 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ATMINO43313 823 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PPP1R11O60927 126 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MAP3K6O95382 1288 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ERCC1P07992 297 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CD63P08962 238 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CDK4P11802 303 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 TCN2P20062 427 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 AFF3P51826 1226 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 GMFBP60983 142 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 SRP54P61011 504 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 JAG1P78504 1218 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 AP5B1Q2VPB7 878 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CRTC1Q6UUV9 634 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 PEG10Q86TG7 708 aaKnown RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 HORMAD2Q8N7B1 307 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 C1orf54Q8WWF1 131 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CYP2S1Q96SQ9 504 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 MND1Q9BWT6 205 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 RAB11FIP5Q9BXF6 653 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 RIC8BQ9NVN3 520 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 SLC12A4Q9UP95 1085 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 NOTOA8MTQ0 251 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ACOT7O00154 380 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 FOXN3O00409 490 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-202ENST00000409435 ACP5P13686 325 aa7.26□□□□□ -1.25
SCN9A-202ENST00000409435 CACHD1Q5VU97 1274 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 242.2 ms