RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CDK14O94921 469 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 DLGAP3O95886 979 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CST1P01037 141 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 S100BP04271 92 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 POU2F1P14859 743 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 EDNRBP24530 442 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 MTHFRP42898 656 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 MAP2K4P45985 399 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 RHDQ02161 417 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CLCQ05315 142 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 FAM171A1Q5VUB5 890 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ANKRD26P1Q6NSI1 321 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 DENND1CQ8IV53 801 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SLC15A3Q8IY34 581 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SYTL1Q8IYJ3 562 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CLIP4Q8N3C7 705 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TTC39CQ8N584 583 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 C2orf73Q8N5S3 287 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 DTNBP1Q96EV8 351 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TRIM15Q9C019 465 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CATSPERZQ9NTU4 200 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 GID8Q9NWU2 228 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 WWOXQ9NZC7 414 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 IFT80Q9P2H3 777 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 POLG2Q9UHN1 485 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ADAMTS5Q9UNA0 930 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ASB1Q9Y576 335 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 A8MV72 311 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 MITFO75030 526 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 RECQL5O94762 991 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 CELF2O95319 508 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 CAPN1P07384 714 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 DBTP11182 482 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 ODC1P11926 461 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ARNTP27540 789 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 PNPLA4P41247 253 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 DMPKQ09013 629 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TP53BP2Q13625 1128 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 UNC50Q53HI1 259 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 NHSL2Q5HYW2 709 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CAMK1DQ8IU85 385 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 MARVELD2Q8N4S9 558 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 FAM86B1Q8N7N1 296 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 KLHDC9Q8NEP7 349 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 MYLIPQ8WY64 445 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 IGSF8Q969P0 613 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SLCO4A1Q96BD0 722 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TSPAN17Q96FV3 270 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 HERC2P3Q9BVR0 1158 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CINPQ9BW66 212 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 PRKAB1Q9Y478 270 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ZFC3H1O60293 1989 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 CEP290O15078 2479 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 ZNF26P17031 533 aaPredicted RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 RPS9P46781 194 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 CLCN2P51788 898 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 LRRC74AQ0VAA2 488 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 SEMA3AQ14563 771 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 PAFAH1B3Q15102 231 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 MRNIPQ6NTE8 343 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 TPGS1Q6ZTW0 290 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 CLYBLQ8N0X4 340 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 LRRC58Q96CX6 371 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 SLC30A3Q99726 388 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 TLR8Q9NR97 1041 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 FARSBQ9NSD9 589 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 PAIP2BQ9ULR5 123 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 DNMT3AQ9Y6K1 912 aaPredicted RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 PIRO00625 290 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 PTNP21246 168 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 NUDT6P53370 316 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 RAD51Q06609 339 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 TAF10Q12962 218 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 BOP1Q14137 746 aaKnown RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 TGFBIQ15582 683 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 CCDC85BQ15834 202 aaPredicted RBP8.27□□□□□ -1.09
SNX13-201ENST00000409076 CTXN3Q4LDR2 81 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 TECRLQ5HYJ1 363 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 ENPP6Q6UWR7 440 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 PLEKHH3Q7Z736 793 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 HMGN2P46Q86SG4 172 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 ITIH5Q86UX2 942 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 CACTIN-AS1Q8N1I8 211 aa8.27□□□□□ -1.09
SNX13-201ENST00000409076 CRYBG2Q8N1P7 616 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms