RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ADAMTS10Q9H324 1103 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 PRDM8Q9NQV8 689 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 AKAP7Q9P0M2 348 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 CENPBD1B2RD01 187 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 C11orf96Q7Z7L8 435 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 KBTBD6Q86V97 674 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 ZDHHC21Q8IVQ6 265 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 OR8H3Q8N146 312 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 MMP27Q9H306 513 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 H0YAE9 185 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 AURKAO14965 403 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 RFPL1O75677 317 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 C9P02748 559 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 PCSK2P16519 638 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 MACC1Q6ZN28 852 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 CXXC5Q7LFL8 322 aaKnown RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 ALDH16A1Q8IZ83 802 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 MEIOBQ8N635 442 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 OR4L1Q8NH43 312 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 EEF1AKMT1Q8WVE0 214 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 TMBIM1Q969X1 311 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 APOBEC3GQ9HC16 384 aaKnown RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 ARHGEF33A8MVX0 844 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 CXCR6O00574 342 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 OR10H3O60404 316 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 S100A6P06703 90 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GPD2P43304 727 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GAD2Q05329 585 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 SYT16Q17RD7 645 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 IL31RAQ8NI17 732 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TFAP2BQ92481 460 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GFM1Q96RP9 751 aaKnown RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ANKRA2Q9H9E1 313 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ARHGEF4Q9NR80 690 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 E7ESA3 106 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 AGRPO00253 132 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 SLC30A4O14863 429 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 CPNE3O75131 537 aaKnown RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 FGF3P11487 239 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 BAG6P46379 1132 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 OR10A6Q8NH74 314 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 C9orf43Q8TAL5 461 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 MAGEB10Q96LZ2 347 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 RDH12Q96NR8 316 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GAD1Q99259 594 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 KCNS3Q9BQ31 491 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 FBXO44Q9H4M3 255 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 XPNPEP1Q9NQW7 623 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 PIM2Q9P1W9 311 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 C10orf71Q711Q0 1435 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 IGLV3-22A0A075B6J6 115 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 SNX4O95219 450 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GM2AP17900 193 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 IVDP26440 423 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 FBXO43Q4G163 708 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TRIM40Q6P9F5 258 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TBC1D14Q9P2M4 693 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GSAPA4D1B5 854 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ZBTB14O43829 449 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 CTSHP09668 335 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TGFBR2P37173 567 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ZNF45Q02386 682 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 HID1Q8IV36 788 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 HDAC2Q92769 488 aaKnown RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 PRR11Q96HE9 360 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TOR3AQ9H497 397 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 TMEM138Q9NPI0 162 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 EBF1Q9UH73 591 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 GIT1Q9Y2X7 761 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 STON1Q9Y6Q2 735 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
SMPD4-202ENST00000409031 I3L521 148 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 IFNA7P01567 189 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 FGF1P05230 155 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 NOS3P29474 1203 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 MAPK12P53778 367 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 SHROOM1Q2M3G4 852 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-202ENST00000409031 PHOX2BQ99453 314 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ZDHHC2Q9UIJ5 367 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 FAM234BA2RU67 622 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ADAMDEC1O15204 470 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 OR56A5P0C7T3 313 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 PROZP22891 400 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 FMO3P31513 532 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 GRK4P32298 578 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 RPL3P39023 403 aaKnown RBP17.55■□□□□ 0.4
SMPD4-202ENST00000409031 GSK3BP49841 420 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 HLCSP50747 726 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 RORCP51449 518 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 MYBPC1Q00872 1141 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 ELMOD1Q8N336 334 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 DEFB129Q9H1M3 183 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 MYH7BA7E2Y1 1941 aa17.55■□□□□ 0.4
SMPD4-202ENST00000409031 TNFRSF11BO00300 401 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms