RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 WFIKKN2Q8TEU8 576 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 MYLIPQ8WY64 445 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 MRGPRX3Q96LB0 322 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 KLHL32Q96NJ5 620 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 SLC30A3Q99726 388 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CIPCQ9C0C6 399 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 GSTO2Q9H4Y5 243 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 BRD9Q9H8M2 597 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CRLS1Q9UJA2 301 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CDYLQ9Y232 598 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 ATG2AQ2TAZ0 1938 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 TRPC5OSA6NMA1 111 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 SYCE1LA8MT33 242 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 ASLP04424 464 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 CISD3P0C7P0 127 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 FSHRP23945 695 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 FAM78AQ5JUQ0 283 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 PTRHD1Q6GMV3 140 aaKnown RBP18.81■□□□□ 0.6
USP39-202ENST00000409025 CUZD1Q86UP6 607 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 NPAS3Q8IXF0 933 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 BPIFB1Q8TDL5 484 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 FRS2Q8WU20 508 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 SORCS1Q8WY21 1168 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 OR52B2Q96RD2 323 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 SARS2Q9NP81 518 aaKnown RBP18.81■□□□□ 0.6
USP39-202ENST00000409025 GNPTGQ9UJJ9 305 aa18.81■□□□□ 0.6
USP39-202ENST00000409025 GOLGA8QA0A0J9YX86 632 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CCDC189A1A4V9 331 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GOLGA8OA6NCC3 632 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 TTC34A8MYJ7 566 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 B2RBV5 119 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 SUPT3HB4E1H0 165 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 E9PBE3 544 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GOLGA8NF8WBI6 632 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 NEMP1O14524 444 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 KLHL41O60662 606 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 SUPT3HO75486 399 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 SRPRAP08240 638 aaKnown RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 MTHFD2P13995 350 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GFAPP14136 432 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 ACRV1P26436 265 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CPA2P48052 419 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 VASPP50552 380 aaPredicted RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 SEMG2Q02383 582 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 KDSRQ06136 332 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 RIPK1Q13546 671 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 PDCD2Q16342 344 aaPredicted RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 UNC50Q53HI1 259 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 TCEAL5Q5H9L2 206 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 BRAT1Q6PJG6 821 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 TEX9Q8N6V9 391 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 VN1R2Q8NFZ6 395 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GIMAP7Q8NHV1 300 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 LINGO1Q96FE5 620 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 PPP1R36Q96LQ0 422 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 MIPEPQ99797 713 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CCDC28BQ9BUN5 200 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 WDR55Q9H6Y2 383 aaPredicted RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 DZANK1Q9NVP4 752 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 TAS2R1Q9NYW7 299 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 DHRS7Q9Y394 339 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 NPEPPSL1A6NEC2 478 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 BTN3A1O00481 513 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 UGT1A6P19224 532 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 UGT1A1P22309 533 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 UGT1A4P22310 534 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 EPHA3P29320 983 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 UGT1A3P35503 534 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 UGT1A5P35504 534 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CLCN7P51798 805 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 PTSQ03393 145 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 TSNQ15631 228 aaKnown RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 PFKFB4Q16877 469 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 ZDHHC20Q5W0Z9 365 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CPNE9Q8IYJ1 553 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 GPR26Q8NDV2 337 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 EEF1AKMT1Q8WVE0 214 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 SMARCD2Q92925 531 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 PBXIP1Q96AQ6 731 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 ASB16Q96NS5 453 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 ASB2Q96Q27 587 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 CADM1Q9BY67 442 aaKnown RBP18.8■□□□□ 0.6
USP39-202ENST00000409025 NKX2-4Q9H2Z4 354 aa18.8■□□□□ 0.6
USP39-202ENST00000409025 IQCF5A8MTL0 148 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 TMEM233B4DJY2 109 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 CDC7O00311 574 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 GSC2O15499 205 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 ECI2O75521 394 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 NFATC1O95644 943 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 TSPAN12O95859 305 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 LHCGRP22888 699 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 KCNC3Q14003 757 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 SNCBQ16143 134 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 LSM12Q3MHD2 195 aaKnown RBP18.79■□□□□ 0.6
USP39-202ENST00000409025 RARS2Q5T160 578 aaKnown RBP18.79■□□□□ 0.6
USP39-202ENST00000409025 PPP2R2DQ66LE6 453 aa18.79■□□□□ 0.6
USP39-202ENST00000409025 RPS27LQ71UM5 84 aaKnown RBP18.79■□□□□ 0.6
USP39-202ENST00000409025 TMPRSS6Q8IU80 811 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms