RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 HACD3Q9P035 362 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 ARMCX1Q9P291 453 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 AGO1Q9UL18 857 aaKnown RBP12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 L3MBTL1Q9Y468 752 aa12.87□□□□□ -0.35
SMARCB1-203ENST00000407082 DSPP15924 2871 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 LOC285095A0A1B0GVY8 99 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 ACSL4O60488 711 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 PSMG1O95456 288 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CRTAMO95727 393 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SERPINF2P08697 491 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 LTA4HP09960 611 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC35E2BP0CK96 405 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 GNAZP19086 355 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 NCF2P19878 526 aaPredicted RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SAT1P21673 171 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CD86P42081 329 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC1A2P43004 574 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 GRIA4P48058 902 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 DGKEP52429 567 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CDH4P55283 916 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 KDSRQ06136 332 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC34A1Q06495 639 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 ACAP2Q15057 778 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 PCSK7Q16549 785 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 RAP1GAP2Q684P5 730 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 TTC7BQ86TV6 843 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 MFN1Q8IWA4 741 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 PLD6Q8N2A8 252 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CAMKK1Q8N5S9 505 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 GPATCH11Q8N954 259 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 TADA1Q96BN2 335 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 VCX3BQ9H321 246 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 NOL6Q9H6R4 1146 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 COG4Q9H9E3 785 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CAB39LQ9H9S4 337 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 TCF7L2Q9NQB0 619 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CDYLQ9Y232 598 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 SPEGQ15772 3267 aa12.86□□□□□ -0.35
SMARCB1-203ENST00000407082 CCDC189A1A4V9 331 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 PATE3B3GLJ2 98 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 TAF4O00268 1085 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 CLDN11O75508 207 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 LATS1O95835 1130 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 PEX11BO96011 259 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 EGFP01133 1207 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 ARSAP15289 507 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 OGNP20774 298 aaKnown RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 CTBP1Q13363 440 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 TUBB3Q13509 450 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 TAF11Q15544 211 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 EML3Q32P44 896 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 HSF5Q4G112 596 aaPredicted RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 ADGRF1Q5T601 910 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 CES4AQ5XG92 561 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 C16orf89Q6UX73 402 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 TFAP2DQ7Z6R9 452 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 TREML1Q86YW5 311 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 SLC25A41Q8N5S1 370 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 RBM15BQ8NDT2 890 aaKnown RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 GPR150Q8NGU9 434 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 RP9Q8TA86 221 aaKnown RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 BRSK1Q8TDC3 778 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 KCTD4Q8WVF5 259 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 EBF4Q9BQW3 602 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 THTPAQ9BU02 230 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 YY1AP1Q9H869 796 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF395Q9H8N7 513 aaPredicted RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF358Q9NW07 568 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 KLK13Q9UKR3 277 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 ASPMQ8IZT6 3477 aa12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 GCN1Q92616 2671 aaKnown RBP12.85□□□□□ -0.35
SMARCB1-203ENST00000407082 SPAARA0A1B0GVQ0 90 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 RGSL1A5PLK6 1076 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 MROH6A6NGR9 719 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 J3KR12 359 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 MATN2O00339 956 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 ZNF195O14628 629 aa12.84□□□□□ -0.35
SMARCB1-203ENST00000407082 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms