RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CBWD6Q4V339 395 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CBWD3Q5JTY5 395 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 DHRS7BQ6IAN0 325 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF517Q6ZMY9 492 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 ERN2Q76MJ5 926 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 SAMD14Q8IZD0 417 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 TSPAN14Q8NG11 270 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CFAP61Q8NHU2 1237 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CEP76Q8TAP6 659 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 GDAP1Q8TB36 358 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 MRPS27Q92552 414 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMEM18Q96B42 140 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 OTULINQ96BN8 352 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 HDAC11Q96DB2 347 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF830Q96NB3 372 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 GBP5Q96PP8 586 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 FNBP1Q96RU3 617 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CITED2Q99967 270 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 PCGF1Q9BSM1 259 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 FAM129AQ9BZQ8 928 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 RTN4RQ9BZR6 473 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 SPATC1LQ9H0A9 340 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 PPIL3Q9H2H8 161 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLCO5A1Q9H2Y9 848 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 CHMP4BQ9H444 224 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 HINT3Q9NQE9 182 aaKnown RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 PFDN4Q9NQP4 134 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 HAO2Q9NYQ3 351 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 DNAJB9Q9UBS3 223 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 UBA2Q9UBT2 640 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 RAI2Q9Y5P3 530 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 SNX5Q9Y5X3 404 aa4.93□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMEM272A0A1B0GTI8 110 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 B4DGG1 531 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 PROB1E7EW31 1015 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 H3BQ06 376 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 PSMD14O00487 310 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 INSIG1O15503 277 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 MTA2O94776 668 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLCO2B1O94956 709 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 NDUFB4O95168 129 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 OAZ2O95190 189 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 ICAM1P05362 532 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 FDPSP14324 419 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 ATP6V1B1P15313 513 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 MAOAP21397 527 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 MYF6P23409 242 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 NPY4RP50391 375 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 METAP2P50579 478 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 RAB28P51157 221 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 ARSEP51690 589 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 ADORA2A-AS1P86434 159 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 SREBF2Q12772 1141 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 E2F5Q15329 346 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 PNLIPRP3Q17RR3 467 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 LETM2Q2VYF4 491 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 MPP7Q5T2T1 576 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 CAVIN1Q6NZI2 390 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 PET117Q6UWS5 81 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 COLCA1Q6ZS62 124 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 GPSM1Q86YR5 675 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 SCCPDHQ8NBX0 429 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 AGBL3Q8NEM8 1001 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 TMEM163Q8TC26 289 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 BICD2Q8TD16 824 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF570Q96NI8 536 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 SPAG5Q96R06 1193 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 THUMPD3Q9BV44 507 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 FAM234AQ9H0X4 552 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 KCNN2Q9H2S1 579 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 PIGMQ9H3S5 423 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 AAMDCQ9H7C9 122 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 TRPV4Q9HBA0 871 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 EPB41L5Q9HCM4 733 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 CISD1Q9NZ45 108 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 IL17BQ9UHF5 180 aa4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.92□□□□□ -1.62
HMGB1P13-201ENST00000406019 CCDC188H7C350 402 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 MAP2K7O14733 419 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 WDR46O15213 610 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SYNCRIPO60506 623 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 RSL1D1O76021 490 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SIX3O95343 332 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLU7O95391 586 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 BCL10O95999 233 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 CHRNB1P11230 501 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 ERCC2P18074 760 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 UBA1P22314 1058 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 HOXC13P31276 330 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 TCF7P36402 384 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 AVPR1AP37288 418 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 CDH12P55289 794 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SIRPAP78324 504 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 GRSF1Q12849 480 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 FHL1Q13642 323 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 ZNF273Q14593 569 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 ARMC4Q5T2S8 1044 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 HEPHL1Q6MZM0 1159 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms