RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 C1DQ13901 141 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 CRY1Q16526 586 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SOWAHAQ2M3V2 549 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NANOGP8Q6NSW7 305 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 UGT3A1Q6NUS8 523 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 GALNT12Q8IXK2 581 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TMEM192Q8IY95 271 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 VPS37AQ8NEZ2 397 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 OR10A6Q8NH74 314 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RASSF5Q8WWW0 418 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SH3YL1Q96HL8 342 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HBEGFQ99075 208 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 DEFB129Q9H1M3 183 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SLC38A7Q9NVC3 462 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 B3GNT3Q9Y2A9 372 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TCRBV3S1A0A5B6 114 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ELOVL7A1L3X0 281 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 C2orf81A6NN90 581 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 CLDN5O00501 218 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 IMPDH1P20839 514 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 DCKP27707 260 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 CLDN10P78369 228 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 MED22Q15528 200 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TAB1Q15750 504 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ATP6AP1Q15904 470 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FAM187BQ17R55 369 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ZNF404Q494X3 552 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HSF5Q4G112 596 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PRR23BQ6ZRT6 265 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FBXO16Q8IX29 292 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FAM9CQ8IZT9 166 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ASCC1Q8N9N2 400 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NIFKQ9BYG3 293 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 XYLT2Q9H1B5 865 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SP140LQ9H930 580 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FZD10Q9ULW2 581 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 POLR3HQ9Y535 204 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TIMM13Q9Y5L4 95 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 A0A1B0GUL6 1792 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 A0A1W2PQ72 361 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FAM47E-STBD1D6RA91 191 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NME4O00746 187 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ACOT8O14734 319 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 XPNPEP2O43895 674 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RFPL2O75678 378 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SLC35E2BP0CK96 405 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ARF4P18085 180 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NR4A2P43354 598 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 MAGEA6P43360 314 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 MAXP61244 160 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 DDX39BQ13838 428 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SMU1Q2TAY7 513 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TPRG1LQ5T0D9 272 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PLET1Q6UQ28 207 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SH2D5Q6ZV89 423 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NECAB2Q7Z6G3 386 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 CAMKK1Q8N5S9 505 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 B3GALNT2Q8NCR0 500 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TDRD1Q9BXT4 1180 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RBM38Q9H0Z9 239 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 TPK1Q9H3S4 243 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 CATSPERZQ9NTU4 200 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 KLQ9UEF7 1012 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PHRF1Q9P1Y6 1649 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 A0A1W2PP18 115 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HMX2A2RU54 273 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FFAR3O14843 346 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 GPR42O15529 346 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RGS14O43566 566 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 JUNP05412 331 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HIST1H2AGP0C0S8 130 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HIST1H2ADP20671 130 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 OAZ1P54368 228 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 EMP3P54852 163 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 GNG2P59768 71 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 IL2P60568 153 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 OLR1P78380 273 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 FOXM1Q08050 763 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ELP6Q0PNE2 266 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 NCF4Q15080 339 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PLEKHG6Q3KR16 790 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RBM20Q5T481 1227 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SZRD1Q7Z422 152 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 SNX29P2Q8IUI4 249 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HID1Q8IV36 788 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PTCD2Q8WV60 388 aaKnown RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 AURKBQ96GD4 344 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HIST1H2AHQ96KK5 128 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 RPRD1AQ96P16 312 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 HIST1H2AJQ99878 128 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 H2AFJQ9BTM1 129 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 ZNF112Q9UJU3 913 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 PCDHB3Q9Y5E6 796 aa7.35□□□□□ -1.23
HDAC9-202ENST00000405010 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-202ENST00000405010 LOC100130705A0A1B0GUX0 176 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms