RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 GOT2P00505 430 aaKnown RBP29.08■■■□□ 2.25
USP42-202ENST00000404008 POLBP06746 335 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 ARNTP27540 789 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 CACNG1Q06432 222 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 EIF2B5Q13144 721 aaKnown RBP29.08■■■□□ 2.25
USP42-202ENST00000404008 ZNF423Q2M1K9 1284 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 HLA-BQ31612 363 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 GPR33Q49SQ1 333 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 ZRANB3Q5FWF4 1079 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 HP1BP3Q5SSJ5 553 aaPredicted RBP29.08■■■□□ 2.25
USP42-202ENST00000404008 KIAA0930Q6ICG6 404 aaPredicted RBP29.08■■■□□ 2.25
USP42-202ENST00000404008 PRR23CQ6ZRP0 262 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 OR6P1Q8NGX9 317 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 IFT81Q8WYA0 676 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 FOXP3Q9BZS1 431 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 PHACTR1Q9C0D0 580 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 FGF22Q9HCT0 170 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 CHMP2BQ9UQN3 213 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 SLC17A4Q9Y2C5 497 aa29.08■■■□□ 2.25
USP42-202ENST00000404008 TRBV5-4A0A0C4DH59 114 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 ZCWPW2A0A1B0GU75 182 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 EIF3HO15372 352 aaKnown RBP eCLIP29.07■■■□□ 2.24
USP42-202ENST00000404008 CEACAM5P06731 702 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 PRSS56P0CW18 603 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 PAMP19021 973 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 FOXN2P32314 431 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 CUL1Q13616 776 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 FASTKD3Q14CZ7 662 aaKnown RBP29.07■■■□□ 2.24
USP42-202ENST00000404008 CCNJLQ8IV13 435 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 IFT20Q8IY31 132 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 DDHD1Q8NEL9 900 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 OR4L1Q8NH43 312 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 ULK4Q96C45 1275 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 ELF4Q99607 663 aaPredicted RBP29.07■■■□□ 2.24
USP42-202ENST00000404008 ARFGAP3Q9NP61 516 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 KLQ9UEF7 1012 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 CRLS1Q9UJA2 301 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 TMEM98Q9Y2Y6 226 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 KNL1Q8NG31 2342 aa29.07■■■□□ 2.24
USP42-202ENST00000404008 TNFRSF10CO14798 259 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 GFRA3O60609 400 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 VAPBO95292 243 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 ECHS1P30084 290 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 CARSP49589 748 aaKnown RBP29.06■■■□□ 2.24
USP42-202ENST00000404008 CDKN1CP49918 316 aaPredicted RBP29.06■■■□□ 2.24
USP42-202ENST00000404008 ALG11Q2TAA5 492 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 ZNF648Q5T619 568 aaPredicted RBP29.06■■■□□ 2.24
USP42-202ENST00000404008 GPRC6AQ5T6X5 926 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 KCTD16Q68DU8 428 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 PSAPL1Q6NUJ1 521 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 DOK6Q6PKX4 331 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 ANKMY2Q8IV38 441 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 PIANPQ8IYJ0 282 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 NXPE1Q8N323 547 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 OXR1Q8N573 874 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 GTPBP2Q9BX10 602 aaKnown RBP29.06■■■□□ 2.24
USP42-202ENST00000404008 GAREM1Q9H706 876 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 TRIM39Q9HCM9 518 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 VPS18Q9P253 973 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 KLF15Q9UIH9 416 aa29.06■■■□□ 2.24
USP42-202ENST00000404008 EP300Q09472 2414 aaPredicted RBP29.06■■■□□ 2.24
USP42-202ENST00000404008 FOXD2O60548 495 aaPredicted RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 TTC4O95801 387 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 CER1O95813 267 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 CSF2P04141 144 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 ARCN1P48444 511 aaKnown RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 POLD2P49005 469 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 SRP54P61011 504 aaKnown RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 TUBB4BP68371 445 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 CRYMQ14894 314 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 KHDC1Q4VXA5 237 aaKnown RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 ZNF542PQ5EBM4 170 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 LDLRAP1Q5SW96 308 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 PRAMEF14Q5SWL7 426 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 ZBED8Q8IZ13 594 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 FBXO36Q8NEA4 188 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 GDAP1Q8TB36 358 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 OR1E3Q8WZA6 343 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 TSACCQ96A04 125 aaPredicted RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 PDXPQ96GD0 296 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 PLAC1Q9HBJ0 212 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 SAYSD1Q9NPB0 183 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 MRPL40Q9NQ50 206 aaKnown RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 DNAJC28Q9NX36 388 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 ZC3H7BQ9UGR2 993 aaKnown RBP29.05■■■□□ 2.24
USP42-202ENST00000404008 FAM169AQ9Y6X4 670 aa29.05■■■□□ 2.24
USP42-202ENST00000404008 PRSS38A1L453 326 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 DFNA5O60443 496 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 ASMTLO95671 621 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 NME1P15531 152 aaKnown RBP29.04■■■□□ 2.24
USP42-202ENST00000404008 HLTFQ14527 1009 aaKnown RBP eCLIP29.04■■■□□ 2.24
USP42-202ENST00000404008 SPANXN3Q5MJ09 141 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 ADGRG6Q86SQ4 1221 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 MINDY1Q8N5J2 469 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 GPR161Q8N6U8 529 aaKnown RBP29.04■■■□□ 2.24
USP42-202ENST00000404008 OR2I1PQ8NGU4 316 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 SCARF2Q96GP6 870 aaPredicted RBP29.04■■■□□ 2.24
USP42-202ENST00000404008 IL21RQ9HBE5 538 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 RXFP3Q9NSD7 469 aa29.04■■■□□ 2.24
USP42-202ENST00000404008 CATSPERZQ9NTU4 200 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms