RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ZRANB3Q5FWF4 1079 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 ADIPOR2Q86V24 386 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.33
NDEL1-203ENST00000402554 AHI1Q8N157 1196 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 PIWIL2Q8TC59 973 aaKnown RBP13.02□□□□□ -0.33
NDEL1-203ENST00000402554 LPGAT1Q92604 370 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 UBXN10Q96LJ8 280 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 SORT1Q99523 831 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 UNKQ9C0B0 810 aaKnown RBP13.02□□□□□ -0.33
NDEL1-203ENST00000402554 CCDC68Q9H2F9 335 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
NDEL1-203ENST00000402554 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 UBA6A0AVT1 1052 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 POP4O95707 220 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 RBP1P09455 135 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 SP9P0CG40 484 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 TIE1P35590 1138 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 TTPAP49638 278 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 SUOXP51687 545 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 AQP5P55064 265 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 RAD51Q06609 339 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 DMWDQ09019 674 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ASPHQ12797 758 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ACAP2Q15057 778 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 AARS2Q5JTZ9 985 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 NAPRTQ6XQN6 538 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 PIM3Q86V86 326 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 TERB1Q8NA31 727 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ATOH1Q92858 354 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 GATA5Q9BWX5 397 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 CPEB1Q9BZB8 566 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 FAM96AQ9H5X1 160 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 SLCO3A1Q9UIG8 710 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 FNDC3AQ9Y2H6 1198 aaKnown RBP13.01□□□□□ -0.33
NDEL1-203ENST00000402554 CAPN7Q9Y6W3 813 aa13.01□□□□□ -0.33
NDEL1-203ENST00000402554 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 DLX3O60479 287 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 DNAJC8O75937 253 aaPredicted RBP13□□□□□ -0.33
NDEL1-203ENST00000402554 SRP72O76094 671 aaKnown RBP13□□□□□ -0.33
NDEL1-203ENST00000402554 HSPA4LO95757 839 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 FMO4P31512 558 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 ARRB2P32121 409 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 HNF1BP35680 557 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 EIF2DP41214 584 aaKnown RBP13□□□□□ -0.33
NDEL1-203ENST00000402554 DGKGP49619 791 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 CDKN1CP49918 316 aaPredicted RBP13□□□□□ -0.33
NDEL1-203ENST00000402554 CCNHP51946 323 aaPredicted RBP13□□□□□ -0.33
NDEL1-203ENST00000402554 NUBP1P53384 320 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 XIAPP98170 497 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 NHLH1Q02575 133 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 CACNG1Q06432 222 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 TECRLQ5HYJ1 363 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 SPDYAQ5MJ70 313 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 PSAPL1Q6NUJ1 521 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 TMEM207Q6UWW9 146 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 SPEM1Q8N4L4 309 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 EID2BQ96D98 161 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 PRRX2Q99811 253 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 C19orf43Q9BQ61 176 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 KCNH6Q9H252 994 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 SUV39H2Q9H5I1 410 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 HCN2Q9UL51 889 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 ERVW-1Q9UQF0 538 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 SLC30A1Q9Y6M5 507 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 R4GN57 208 aa13□□□□□ -0.33
NDEL1-203ENST00000402554 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 PRRT4C9JH25 899 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 CISD3P0C7P0 127 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-203ENST00000402554 ATP5F1P24539 256 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-203ENST00000402554 SERPINB3P29508 390 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 GRIA2P42262 883 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 PXNP49023 591 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-203ENST00000402554 TIAL1Q01085 375 aaKnown RBP eCLIP12.99□□□□□ -0.33
NDEL1-203ENST00000402554 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
NDEL1-203ENST00000402554 TMEM215Q68D42 235 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 ATG14Q6ZNE5 492 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 DPY19L3Q6ZPD9 716 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 TAS2R42Q7RTR8 314 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 ZSWIM9Q86XI8 627 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■■■■ 45.8
NDEL1-203ENST00000402554 VOPP1Q96AW1 172 aa12.99□□□□□ -0.33
NDEL1-203ENST00000402554 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms