RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 OR2AG2A6NM03 316 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 BMP7P18075 431 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 NUDT1P36639 197 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 HCAR3P49019 387 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 AQP5P55064 265 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 RPL10LQ96L21 214 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 DUSP9Q99956 384 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 FNDC11Q9BVV2 318 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 ACAT2Q9BWD1 397 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 GEMIN8Q9NWZ8 242 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 RRP15Q9Y3B9 282 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 CLCA3PQ9Y6N3 262 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 RPSAP08865 295 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 UGT1A1P22309 533 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 TALDO1P37837 337 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 FMO1Q01740 532 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 ST3GAL1Q11201 340 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 SF3B4Q15427 424 aaKnown RBP eCLIP7.9□□□□□ -1.141e-6■□□□□ 10.9
USP47-203ENST00000399455 TCHHL1Q5QJ38 904 aaPredicted RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 TMEM63BQ5T3F8 832 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 PAOXQ6QHF9 649 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 RIPOR1Q6ZS17 1223 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 SNX20Q7Z614 316 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 PEG10Q86TG7 708 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 CIR1Q86X95 450 aaPredicted RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 GJD3Q8N144 294 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 EPS8L3Q8TE67 593 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 MSANTD3Q96H12 275 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 NDNQ99608 321 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 OSER1Q9NX31 292 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CALML5Q9NZT1 146 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 SPIN1Q9Y657 262 aaPredicted RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 IPO13O94829 963 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 OR6B1O95007 311 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 LDOC1O95751 146 aaPredicted RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 GALTP07902 379 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 HBQ1P09105 142 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CYP4F2P78329 520 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 PRR5P85299 388 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 MYBPC1Q00872 1141 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 SQLEQ14534 574 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CYTH1Q15438 398 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 EIF3MQ7L2H7 374 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 SERPINA9Q86WD7 417 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CMTM8Q8IZV2 173 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 NCSTNQ92542 709 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 BDH2Q9BUT1 245 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 RETREG1Q9H6L5 497 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 PIAS3Q9Y6X2 628 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 NAV1Q8NEY1 1877 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 OR5K4A6NMS3 321 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 BTNL10A8MVZ5 291 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 TOP3BO95985 862 aaKnown RBP7.9□□□□□ -1.15
USP47-203ENST00000399455 MT-CYBP00156 380 aaPredicted RBP7.9□□□□□ -1.15
USP47-203ENST00000399455 TFEBP19484 476 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 FGFR3P22607 806 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 RPS15P62841 145 aaKnown RBP7.9□□□□□ -1.15
USP47-203ENST00000399455 NR0B2Q15466 257 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 ZNF783Q6ZMS7 281 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 SERINC5Q86VE9 423 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 SLC43A3Q8NBI5 491 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 PNPLA2Q96AD5 504 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 QKIQ96PU8 341 aaKnown RBP eCLIP7.9□□□□□ -1.15
USP47-203ENST00000399455 SMAD5Q99717 465 aaKnown RBP7.9□□□□□ -1.15
USP47-203ENST00000399455 NMUR1Q9HB89 426 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 IGSF9Q9P2J2 1179 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 RAPGEFL1Q9UHV5 662 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 DKKL1Q9UK85 242 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 MYH2Q9UKX2 1941 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 A0A0J9YVX5 310 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 CCDC81Q6ZN84 652 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 DNASE1L2Q92874 299 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 ERP27Q96DN0 273 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 MCMBPQ9BTE3 642 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 TTYH1Q9H313 450 aaPredicted RBP7.9□□□□□ -1.15
USP47-203ENST00000399455 ARHGAP20Q9P2F6 1191 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 COG5Q9UP83 839 aa7.9□□□□□ -1.15
USP47-203ENST00000399455 FFAR3O14843 346 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 GPR42O15529 346 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 PI15O43692 258 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 RECQL5O94762 991 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 BGNP21810 368 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 RPL14P50914 215 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 DEFA1P59665 94 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 DEFA3P59666 94 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 PON2Q15165 354 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 MYLK3Q32MK0 819 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC10A6Q3KNW5 377 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TYW3Q6IPR3 259 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 SLC30A9Q6PML9 568 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 RNF19BQ6ZMZ0 732 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 APTXQ7Z2E3 356 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 C2orf73Q8N5S3 287 aaPredicted RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 TMEM156Q8N614 296 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 TERB1Q8NA31 727 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 UTP15Q8TED0 518 aaKnown RBP7.89□□□□□ -1.15
USP47-203ENST00000399455 RTP3Q9BQQ7 232 aa7.89□□□□□ -1.15
USP47-203ENST00000399455 KLC4Q9NSK0 619 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms