RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ECI2O75521 394 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 PRR35P0CG20 571 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 TTC33Q6PID6 262 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-203ENST00000398969 ZNF598Q86UK7 904 aaKnown RBP25.42■■□□□ 1.66
COL13A1-203ENST00000398969 ZNF786Q8N393 782 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 TSPEARQ8WU66 669 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 MYEOVQ96EZ4 313 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 FAM50BQ9Y247 325 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 TIMM22Q9Y584 194 aa25.42■■□□□ 1.66
COL13A1-203ENST00000398969 CRCPO75575 148 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 GPIP06744 558 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 RPS17P08708 135 aaKnown RBP25.41■■□□□ 1.66
COL13A1-203ENST00000398969 CKBP12277 381 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 YBEYP58557 167 aaPredicted RBP25.41■■□□□ 1.66
COL13A1-203ENST00000398969 ANKS6Q68DC2 871 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 LHX8Q68G74 356 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 SPATA19Q7Z5L4 167 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 ZNF280BQ86YH2 543 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 TRPV3Q8NET8 790 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 TNIP2Q8NFZ5 429 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 PREBQ9HCU5 417 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 MARCH2Q9P0N8 246 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 OAZ3Q9UMX2 235 aa25.41■■□□□ 1.66
COL13A1-203ENST00000398969 A0A087WXM4 84 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 ASPDHA6ND91 283 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 GNRH1P01148 92 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 INHAP05111 366 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 MTHFD1P11586 935 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 FMO4P31512 558 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 GSK3BP49841 420 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 DCTN2Q13561 401 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 NFYCQ13952 458 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 RCAN2Q14206 197 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 NFE2Q16621 373 aaPredicted RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 SLC36A3Q495N2 470 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 RABL3Q5HYI8 236 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 SPRED1Q7Z699 444 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 DNAJB14Q8TBM8 379 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 VPS33AQ96AX1 596 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TEX37Q96LM6 180 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 PDFQ9HBH1 243 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 AIG1Q9NVV5 245 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 PTBP2Q9UKA9 531 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 OAS3Q9Y6K5 1087 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 RNF103-CHMP3A0A140T963 221 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 LCHNA4D1U4 455 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 ACOX3O15254 700 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 CYBBP04839 570 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 ZFP36L2P47974 494 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TSNQ15631 228 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TTC9BQ8N6N2 239 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 ZNF599Q96NL3 588 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TRIB3Q96RU7 358 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TSEN34Q9BSV6 310 aaKnown RBP25.4■■□□□ 1.66
COL13A1-203ENST00000398969 ALG2Q9H553 416 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 TAS2R13Q9NYV9 303 aa25.4■■□□□ 1.66
COL13A1-203ENST00000398969 RASAL1O95294 804 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 SERPINF2P08697 491 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 MAPKAPK2P49137 400 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 MRPL19P49406 292 aaKnown RBP25.39■■□□□ 1.66
COL13A1-203ENST00000398969 EMP3P54852 163 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 KCNK10P57789 538 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 CYP51A1Q16850 503 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 MUC3BQ9H195 1237 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 MUC13Q9H3R2 512 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 NLE1Q9NVX2 485 aaPredicted RBP25.39■■□□□ 1.66
COL13A1-203ENST00000398969 IL37Q9NZH6 218 aa25.39■■□□□ 1.66
COL13A1-203ENST00000398969 TCRBV5S2A0A599 114 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 SLC12A8A0AV02 714 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 CDC7O00311 574 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 INPP4BO15327 924 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 INPPL1O15357 1258 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 NDST3O95803 873 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 RAD51Q06609 339 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 C10orf120Q5SQS8 335 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 IFNEQ86WN2 208 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 PTRH1Q86Y79 214 aaKnown RBP25.39■■□□□ 1.65
COL13A1-203ENST00000398969 FBXO32Q969P5 355 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 BIRC8Q96P09 236 aa25.39■■□□□ 1.65
COL13A1-203ENST00000398969 TRIM64A6NGJ6 449 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 BAIAP3O94812 1187 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 IGLV3-27P01718 113 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 FCGR1AP12314 374 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 PRDX3P30048 256 aaKnown RBP25.38■■□□□ 1.65
COL13A1-203ENST00000398969 RANBP1P43487 201 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 ZNF140P52738 457 aaPredicted RBP25.38■■□□□ 1.65
COL13A1-203ENST00000398969 LIPEQ05469 1076 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 GRIK2Q13002 908 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 PAGE3Q5JUK9 113 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 TMTC4Q5T4D3 741 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 TRAF7Q6Q0C0 670 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 GPR141Q7Z602 305 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 SYVN1Q86TM6 617 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 ADAMTS16Q8TE57 1224 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 FUBP1Q96AE4 644 aaKnown RBP25.38■■□□□ 1.65
COL13A1-203ENST00000398969 NUSAP1Q9BXS6 441 aaKnown RBP25.38■■□□□ 1.65
COL13A1-203ENST00000398969 HMX1Q9NP08 348 aaPredicted RBP25.38■■□□□ 1.65
COL13A1-203ENST00000398969 PCDHB5Q9Y5E4 795 aa25.38■■□□□ 1.65
COL13A1-203ENST00000398969 SPO11Q9Y5K1 396 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms