RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 ARHGEF6Q15052 776 aa11□□□□□ -0.65
HPS4-202ENST00000398145 PABPC1LQ4VXU2 614 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 KLHL12Q53G59 568 aa11□□□□□ -0.65
HPS4-202ENST00000398145 SH3D19Q5HYK7 790 aa11□□□□□ -0.65
HPS4-202ENST00000398145 PLD6Q8N2A8 252 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 OR9I1Q8NGQ6 314 aa11□□□□□ -0.65
HPS4-202ENST00000398145 OR10A6Q8NH74 314 aa11□□□□□ -0.65
HPS4-202ENST00000398145 FBXO27Q8NI29 283 aa11□□□□□ -0.65
HPS4-202ENST00000398145 FNDC8Q8TC99 324 aa11□□□□□ -0.65
HPS4-202ENST00000398145 HBEGFQ99075 208 aa11□□□□□ -0.65
HPS4-202ENST00000398145 BCO2Q9BYV7 579 aa11□□□□□ -0.65
HPS4-202ENST00000398145 MOV10Q9HCE1 1003 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 SLC22A1O15245 554 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 LRATO95237 230 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ALDH9A1P49189 494 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CCT3P49368 545 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 NDUFV1P49821 464 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 RBM48Q5RL73 367 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 TMEM192Q8IY95 271 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 OR4K2Q8NGD2 314 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CLHC1Q8NHS4 586 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ISOC1Q96CN7 298 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ERLEC1Q96DZ1 483 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 GPR21Q99679 349 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 AKTIPQ9H8T0 292 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 PRDM5Q9NQX1 630 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 FBXW11Q9UKB1 542 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MOXD2PA6NHM9 499 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 PLK4O00444 970 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TSPAN1O60635 241 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 SNNO75324 88 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 RNASEH2AO75792 299 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 RSL1D1O76021 490 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 F7P08709 466 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 MC4RP32245 332 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 HTR7P34969 479 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 FAM91A1Q658Y4 838 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ELMO1Q92556 727 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 GLT1D1Q96MS3 346 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 NUSAP1Q9BXS6 441 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 MAF1Q9H063 256 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 LRTM1Q9HBL6 345 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 OGDHLQ9ULD0 1010 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CORO2BQ9UQ03 480 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TOPAZ1Q8N9V7 1692 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 SH3PXD2BA1X283 911 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 PRMT5O14744 637 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 HAT1O14929 419 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TBX1O43435 398 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CLPXO76031 633 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 IL6P05231 212 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 PAICSP22234 425 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 CEACAM7Q14002 265 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 HNRNPDQ14103 355 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 CHSY3Q70JA7 882 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 KBTBD6Q86V97 674 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 KLHL28Q9NXS3 571 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MOCS1Q9NZB8 636 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 SSR3Q9UNL2 185 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ASB3Q9Y575 518 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 MYCP01106 439 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 LMO2P25791 158 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 ALDH7A1P49419 539 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 GSK3BP49841 420 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ZNF132P52740 706 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MTPNP58546 118 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 DAOAP59103 153 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 HERVK_113P63132 956 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TNFAIP8L3Q5GJ75 292 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MAP1SQ66K74 1059 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 LBX2Q6XYB7 198 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 CYS1Q717R9 158 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 MON1AQ86VX9 555 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 RAB43Q86YS6 212 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 RBM12BQ8IXT5 1001 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 KLHL32Q96NJ5 620 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 FCRL5Q96RD9 977 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ERVK-6Q9BXR3 956 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 TPK1Q9H3S4 243 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 SMPD4Q9NXE4 827 aa10.99□□□□□ -0.65
HPS4-202ENST00000398145 ZNF624Q9P2J8 865 aaPredicted RBP10.99□□□□□ -0.65
HPS4-202ENST00000398145 YJEFN3A6XGL0 299 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 OR4F21O95013 312 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 PPIBP23284 216 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 DNAJB1P25685 340 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CTSKP43235 329 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 KIR3DL1P43629 444 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CHRNA4P43681 627 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 GSTM5P46439 218 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 DSC2Q02487 901 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 RFTN1Q14699 578 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms