RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CHURC1-FNTBB4DL54 471 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 PRMT5O14744 637 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 PHGDHO43175 533 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 OR1I1O60431 355 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 C6P13671 934 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 PKMP14618 531 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 SLC26A3P40879 764 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 DPTQ07507 201 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 ACOX1Q15067 660 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 AGERQ15109 404 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 TAF1BQ53T94 588 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 CTSL3PQ5NE16 218 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 TMEM92Q6UXU6 159 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 KYAT3Q6YP21 454 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 CENPLQ8N0S6 344 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 RBFAQ8N0V3 343 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 SCAMP4Q969E2 229 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 VPS35Q96QK1 796 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 VPS11Q9H270 941 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 CD84Q9UIB8 345 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 CRLS1Q9UJA2 301 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 EMCNQ9ULC0 261 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 GRID1Q9ULK0 1009 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 ACOT9Q9Y305 439 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 PCDHB1Q9Y5F3 818 aa19.33■□□□□ 0.68
PDLIM2-205ENST00000397761 A0A087X1B8 175 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 A0A1W2PP55 124 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 UBA6A0AVT1 1052 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 KRBA1A5PL33 1030 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 TOP3BO95985 862 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 ZNF7P17097 686 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 SLC12A2P55011 1212 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 PPARDQ03181 441 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 FZD5Q13467 585 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 SETMARQ53H47 684 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 USP30Q70CQ3 517 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 PLD6Q8N2A8 252 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 HDDC3Q8N4P3 179 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 UBXN10Q96LJ8 280 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 RIOK2Q9BVS4 552 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 SPATA16Q9BXB7 569 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 IQCGQ9H095 443 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 KCTD5Q9NXV2 234 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 ZDHHC3Q9NYG2 299 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 PSD3Q9NYI0 1048 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 TLK1Q9UKI8 766 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 FZD4Q9ULV1 537 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 CA14Q9ULX7 337 aa19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 NDRG2Q9UN36 371 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 MRPS17Q9Y2R5 130 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-205ENST00000397761 SRRM3A6NNA2 597 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 NEMP1O14524 444 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 MMP20O60882 483 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 RECQL5O94762 991 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 DNTTP04053 509 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 SAT1P21673 171 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 FMO4P31512 558 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 PGGT1BP53609 377 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 IRF9Q00978 393 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 ZNF460Q14592 562 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 CRY1Q16526 586 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 LVRNQ6Q4G3 990 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 KCNJ9Q92806 393 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 CCDC97Q96F63 343 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 SHDQ96IW2 340 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 MRGPRX1Q96LB2 322 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 GPR78Q96P69 363 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 FAM111AQ96PZ2 611 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 CCDC68Q9H2F9 335 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 C12orf65Q9H3J6 166 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 FBXL12Q9NXK8 326 aa19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 OAS3Q9Y6K5 1087 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-205ENST00000397761 FADS2P1A8MWK0 482 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 PLRG1O43660 514 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 RRP9O43818 475 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 PLIN3O60664 434 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 RNASEH2AO75792 299 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 SOD1P00441 154 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 TARSP26639 723 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 GMPRP36959 345 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 NSG1P42857 185 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 LRRC32Q14392 662 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 LRRC14Q15048 493 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 ZNF284Q2VY69 593 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 TTC31Q49AM3 519 aaPredicted RBP19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 MACC1Q6ZN28 852 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 RAPH1Q70E73 1250 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 KBTBD6Q86V97 674 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 CACUL1Q86Y37 369 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 UBALD2Q8IYN6 164 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 DDHD1Q8NEL9 900 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 MGARPQ8TDB4 240 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 CXorf40AQ8TE69 158 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 CKAP2Q8WWK9 683 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 AP2M1Q96CW1 435 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 NUS1Q96E22 293 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 SIPA1Q96FS4 1042 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 COPS8Q99627 209 aa19.3■□□□□ 0.68
PDLIM2-205ENST00000397761 BOCQ9BWV1 1114 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms