RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 A0A096LPK6 155 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 MPOP05164 745 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 SLC35E2BP0CK96 405 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 CHN1P15882 459 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 STMN1P16949 149 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 ZNF460Q14592 562 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 FAM45BPQ6NSW5 357 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 TRIM67Q6ZTA4 783 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 SPNS2Q8IVW8 549 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 PELI3Q8N2H9 469 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 FAM45AQ8TCE6 357 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 NUS1Q96E22 293 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 C12orf65Q9H3J6 166 aaKnown RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 TBC1D17Q9HA65 648 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 CD93Q9NPY3 652 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 TRPM6Q9BX84 2022 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 COPEO14579 308 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 LZTS3O60299 673 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 PCDH8O95206 1070 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 SOD1P00441 154 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 FDXRP22570 491 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 PPARGP37231 505 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 DGKEP52429 567 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 ADPRHP54922 357 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 ZNF284Q2VY69 593 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 KIAA1324Q6UXG2 1013 aaKnown RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 CLEC14AQ86T13 490 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 RBFAQ8N0V3 343 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 GJD3Q8N144 294 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 TCP10LQ8TDR4 215 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 ULK4Q96C45 1275 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 TTC1Q99614 292 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 VPS11Q9H270 941 aa27.27■■□□□ 1.96
CPNE1-203ENST00000397442 CAMSAP3Q9P1Y5 1249 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 ZFR2Q9UPR6 939 aaKnown RBP27.27■■□□□ 1.96
CPNE1-203ENST00000397442 IGLV3-16A0A075B6K0 115 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 IGLON5A6NGN9 336 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 PRMT5O14744 637 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-203ENST00000397442 WISP3O95389 354 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-203ENST00000397442 PKMP14618 531 aaKnown RBP27.26■■□□□ 1.95
CPNE1-203ENST00000397442 CRHR1P34998 444 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 IRF9Q00978 393 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 DPTQ07507 201 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 SEL1L3Q68CR1 1132 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 KBTBD6Q86V97 674 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 ANKRD42Q8N9B4 389 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 OR14C36Q8NHC7 312 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 CABS1Q96KC9 395 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 ZDHHC3Q9NYG2 299 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 SLC17A7Q9P2U7 560 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 ADAM21Q9UKJ8 722 aa27.26■■□□□ 1.95
CPNE1-203ENST00000397442 ZNF7P17097 686 aaPredicted RBP27.25■■□□□ 1.95
CPNE1-203ENST00000397442 RPS3P23396 243 aaKnown RBP eCLIP27.25■■□□□ 1.953e-8■■■□□ 18.5
CPNE1-203ENST00000397442 CRABP2P29373 138 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 B4GALNT1Q00973 533 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 ITIH4Q14624 930 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 GPRC6AQ5T6X5 926 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 PIM3Q86V86 326 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 PLD6Q8N2A8 252 aaKnown RBP27.25■■□□□ 1.95
CPNE1-203ENST00000397442 HMGB4Q8WW32 186 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 POLMQ9NP87 494 aaPredicted RBP27.25■■□□□ 1.95
CPNE1-203ENST00000397442 PRSS21Q9Y6M0 314 aa27.25■■□□□ 1.95
CPNE1-203ENST00000397442 K7ESM1 405 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 ESR1P03372 595 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 ACADMP11310 421 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 TPMTP51580 245 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 AGERQ15109 404 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 SETMARQ53H47 684 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-203ENST00000397442 RAPH1Q70E73 1250 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 NLRP8Q86W28 1048 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 NAT14Q8WUY8 206 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 TSPAN17Q96FV3 270 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 VPS35Q96QK1 796 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 C1QTNF1Q9BXJ1 281 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 EBF1Q9UH73 591 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 DOCK9Q9BZ29 2069 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 ATG13O75143 517 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 TM7SF2O76062 418 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 ZWINTO95229 277 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 CCT5P48643 541 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 SLC12A2P55011 1212 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 WDR4P57081 412 aaKnown RBP27.24■■□□□ 1.95
CPNE1-203ENST00000397442 CLDN19Q8N6F1 224 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 BTN2A2Q8WVV5 523 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 COPS8Q99627 209 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 MLXIPLQ9NP71 852 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 TLK1Q9UKI8 766 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 PLLPQ9Y342 182 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 PCDHB1Q9Y5F3 818 aa27.24■■□□□ 1.95
CPNE1-203ENST00000397442 TM9SF1O15321 606 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 ETV4P43268 484 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 GUCY1A3Q02108 690 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 FGL2Q14314 439 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 TMEM259Q4ZIN3 620 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 TMEM207Q6UWW9 146 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 CENPLQ8N0S6 344 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-203ENST00000397442 DDHD1Q8NEL9 900 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 PJA1Q8NG27 643 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 MGARPQ8TDB4 240 aa27.23■■□□□ 1.95
CPNE1-203ENST00000397442 CLDN23Q96B33 292 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms