RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 LINGO4Q6UY18 593 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 ASB2Q96Q27 587 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 ARNT2Q9HBZ2 717 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 DUS2Q9NX74 493 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 CNOT11Q9UKZ1 510 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TNFRSF10BO14763 440 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 ATXN1LP0C7T5 689 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 HLA-DPA1P20036 260 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 MAP4P27816 1152 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 POLR2JP52435 117 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 RPS24P62847 133 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 DRAXINQ8NBI3 349 aaPredicted RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TLR8Q9NR97 1041 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TLR5O60602 858 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 PEX11BO96011 259 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 HMOX2P30519 316 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 OXCT1P55809 520 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 BNIP2Q12982 314 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 MORN1Q5T089 497 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 FAM126BQ8IXS8 530 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 C12orf43Q96C57 262 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 SDCCAG3Q96C92 435 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 MUC3BQ9H195 1237 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 HSFX1Q9UBD0 423 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 SPO11Q9Y5K1 396 aa13.03□□□□□ -0.32
HMBOX1-203ENST00000397358 SYCE1LA8MT33 242 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 TMX2-CTNND1H3BSU7 103 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 ASGR1P07306 291 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 TFPTP0C1Z6 253 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 MC4RP32245 332 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 HTR7P34969 479 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 IL10RBQ08334 325 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 DUSP4Q13115 394 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 SYVN1Q86TM6 617 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 TRPV3Q8NET8 790 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 CHID1Q9BWS9 393 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 ATP13A1Q9HD20 1204 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.32
HMBOX1-203ENST00000397358 AQP12BA6NM10 295 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 S100BP04271 92 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 MTHFD2P13995 350 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 SLC2A4P14672 509 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 STC1P52823 247 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 SERINC3Q13530 473 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 ABRAXAS1Q6UWZ7 409 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 AQP12AQ8IXF9 295 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 OR56A4Q8NGH8 313 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 SKA2Q8WVK7 121 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 MTFMTQ96DP5 389 aaKnown RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 TIMMDC1Q9NPL8 285 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 HACD3Q9P035 362 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 UBA2Q9UBT2 640 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 IKZF3Q9UKT9 509 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 MROH6A6NGR9 719 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 PFDN6O15212 129 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 B4GAT1O43505 415 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 NDST3O95803 873 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 BMP2P12643 396 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 HOXC13P31276 330 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 IL2P60568 153 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 ATP6V0D1P61421 351 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 TRAF2Q12933 501 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 KCTD21Q4G0X4 260 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 DENND1CQ8IV53 801 aa13.02□□□□□ -0.33
HMBOX1-203ENST00000397358 TNIP2Q8NFZ5 429 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms