RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 BPIFB6Q8NFQ5 453 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 TNIP2Q8NFZ5 429 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 THAP11Q96EK4 314 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 CHID1Q9BWS9 393 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 FANCEQ9HB96 536 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
NUP98-204ENST00000397004 UXTQ9UBK9 157 aaPredicted RBP13.85□□□□□ -0.19
NUP98-204ENST00000397004 CCDC162PA2VCL2 907 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SLC7A4O43246 635 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SULT1C4O75897 302 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PCNAP12004 261 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 IL10P22301 178 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 EEF1DP29692 281 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 HLCSP50747 726 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 KPNA2P52292 529 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 ESRRGP62508 458 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 MFSD10Q14728 455 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PTPRRQ15256 657 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 FXNQ16595 210 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 MAP7D1Q3KQU3 841 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SLC2A7Q6PXP3 512 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CIR1Q86X95 450 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 ZBTB8BQ8NAP8 495 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 ZNF420Q8TAQ5 688 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 FKBP10Q96AY3 582 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 A0A0U1RQS6 177 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CDC7O00311 574 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SYNCRIPO60506 623 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 IL7RP16871 459 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SUOXP51687 545 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 HK3P52790 923 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 TRAF2Q12933 501 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 LDLRAP1Q5SW96 308 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PAQR3Q6TCH7 311 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PROKR1Q8TCW9 393 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 MIPOL1Q8TD10 442 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 HBEGFQ99075 208 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 TINF2Q9BSI4 451 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CAPN15O75808 1086 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 ZNF189O75820 626 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 SEC14L2O76054 403 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 OR4Q2P0C623 313 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PIGAP37287 484 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CLCQ05315 142 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 GRSF1Q12849 480 aaKnown RBP eCLIP13.84□□□□□ -0.19
NUP98-204ENST00000397004 BNIP2Q12982 314 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 NFYCQ13952 458 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 INPP5AQ14642 412 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 DLEU7Q6UYE1 221 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 GALNT7Q86SF2 657 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 DTWD1Q8N5C7 304 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 SLC27A5Q9Y2P5 690 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 LOC285095A0A1B0GVY8 99 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CYBBP04839 570 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 LBPP18428 481 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 FSHRP23945 695 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 ZNF135P52742 658 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 MLLT6P55198 1093 aaPredicted RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 ITKQ08881 620 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PPP1R8Q12972 351 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 CYP2A13Q16696 494 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 TIGD2Q4W5G0 525 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 XKR7Q5GH72 579 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 PIWIL3Q7Z3Z3 882 aaKnown RBP13.84□□□□□ -0.19
NUP98-204ENST00000397004 VPS50Q96JG6 964 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CDK15Q96Q40 435 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 CD320Q9NPF0 282 aa13.84□□□□□ -0.19
NUP98-204ENST00000397004 NCF1BA6NI72 391 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 NCF1CA8MVU1 366 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 HAS3O00219 553 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 PAPSS2O95340 614 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 NCF1P14598 390 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 PORP16435 677 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 HMOX2P30519 316 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 IDUAP35475 653 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 CACNB2Q08289 660 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 ATP1A4Q13733 1029 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 CTU2Q2VPK5 515 aaKnown RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 IGSF8Q969P0 613 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 SMOC2Q9H3U7 446 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 AIG1Q9NVV5 245 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 DNMT3BQ9UBC3 853 aaKnown RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 SOBPA7XYQ1 873 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 GPIP06744 558 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 CRYBB1P53674 252 aaPredicted RBP13.83□□□□□ -0.2
NUP98-204ENST00000397004 ACVR1Q04771 509 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 GALNT3Q14435 633 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 SPCS2Q15005 226 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 GEN1Q17RS7 908 aa13.83□□□□□ -0.2
NUP98-204ENST00000397004 SLC16A12Q6ZSM3 486 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms