RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 AK4P27144 223 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 ARSDP51689 593 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 MAZP56270 477 aaKnown RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 OR1D5P58170 312 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 MAXP61244 160 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CYP4F2P78329 520 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 GBE1Q04446 702 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 IL10RBQ08334 325 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 NSUN2Q08J23 767 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 IHHQ14623 411 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 C16orf72Q14CZ0 275 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PPP1R7Q15435 360 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 C14orf28Q4W4Y0 310 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 DENND2CQ68D51 928 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 TTC27Q6P3X3 843 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 DARS2Q6PI48 645 aaKnown RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 NPNTQ6UXI9 565 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 ZNF574Q6ZN55 896 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 HSD11B1LQ7Z5J1 315 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 VASH2Q86V25 355 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 ZFAND4Q86XD8 727 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CDKL3Q8IVW4 592 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 SLITRK4Q8IW52 837 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CBARPQ8N350 705 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 LRRN4CLQ8ND94 238 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 SLC35B2Q8TB61 432 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CCHCR1Q8TD31 782 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 TFB1MQ8WVM0 346 aaKnown RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 SLCO2A1Q92959 643 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PMEPA1Q969W9 287 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 MED8Q96G25 268 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 COQ10AQ96MF6 247 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PSKH2Q96QS6 385 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 FAM118BQ9BPY3 351 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 LRRC1Q9BTT6 524 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 RAB17Q9H0T7 212 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 DPEP2Q9H4A9 486 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 DTLQ9NZJ0 730 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 DNPEPQ9ULA0 475 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 UTP11Q9Y3A2 253 aaKnown RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 LOXL2Q9Y4K0 774 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PCDHGA7Q9Y5G6 932 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PRSS38A1L453 326 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 HTRA2O43464 458 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 STK10O94804 968 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 FGF1P05230 155 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 TUBBP07437 444 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 HOXC4P09017 264 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 MCM3P25205 808 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 STIP1P31948 543 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 ETV3P41162 512 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 KCNJ1P48048 391 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 TERF1P54274 439 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 NFKB2Q00653 900 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 TRAF2Q12933 501 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 EIF3IQ13347 325 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 LBRQ14739 615 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 OASLQ15646 514 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 ERCC6LQ2NKX8 1250 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 AMZ1Q400G9 498 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 USP53Q70EK8 1073 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 HEATR4Q86WZ0 1026 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 C17orf82Q86X59 251 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 LRRC49Q8IUZ0 686 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 CCDC89Q8N998 374 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 CCNYQ8ND76 341 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 RCBTB1Q8NDN9 531 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 OR6C4Q8NGE1 309 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 PDCD6IPQ8WUM4 868 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 JPH3Q8WXH2 748 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 EXTL1Q92935 676 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 USP7Q93009 1102 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 NUDT22Q9BRQ3 303 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 STRADBQ9C0K7 418 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 WDR26Q9H7D7 661 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 CARS2Q9HA77 564 aaKnown RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 ACSL6Q9UKU0 697 aa10.29□□□□□ -0.76
NEDD8-202ENST00000396828 V9GYY5 206 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-202ENST00000396828 SDK2Q58EX2 2172 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 NPIPB15A6NHN6 443 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TNFRSF10CO14798 259 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 NVLO15381 856 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 TTI1O43156 1089 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 CTIFO43310 598 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 MTSS1O43312 755 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 RAD51CO43502 376 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 NUDT21O43809 227 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 MAFKO60675 156 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 HEXIM1O94992 359 aaKnown RBP10.28□□□□□ -0.76
NEDD8-202ENST00000396828 MAP3K6O95382 1288 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 SOD1P00441 154 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 PDHA1P08559 390 aa10.28□□□□□ -0.76
NEDD8-202ENST00000396828 JMJD7P0C870 316 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms