RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 FRMD7Q6ZUT3 714 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TMEM102Q8N9M5 508 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 HJURPQ8NCD3 748 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 DDHD1Q8NEL9 900 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 HM13Q8TCT9 377 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 BRSK1Q8TDC3 778 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CCDC124Q96CT7 223 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 CMTM5Q96DZ9 223 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ZNF597Q96LX8 424 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ZNF512Q96ME7 567 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 RILPQ96NA2 401 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ASB2Q96Q27 587 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 MCCC1Q96RQ3 725 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 TRIM56Q9BRZ2 755 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 TRMOQ9BU70 441 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 NUF2Q9BZD4 464 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TWSG1Q9GZX9 223 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 MAN1C1Q9NR34 630 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 OLAHQ9NV23 265 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 THAP1Q9NVV9 213 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 LHX3Q9UBR4 397 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 HS3ST2Q9Y278 367 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 B3GNT3Q9Y2A9 372 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 N6AMT1Q9Y5N5 214 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TCF20Q9UGU0 1960 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 IGLV3-16A0A075B6K0 115 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 TRIM64A6NGJ6 449 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 G3V2L1 256 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 EIF2S1P05198 315 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 APRTP07741 180 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 INHBAP08476 426 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 NELFEP18615 380 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 NFKB1P19838 968 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 FDXRP22570 491 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 TEAD1P28347 426 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 SLC6A4P31645 630 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 GRIA4P48058 902 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 ALDH7A1P49419 539 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 GNA12Q03113 381 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 GRIK2Q13002 908 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 E2F2Q14209 437 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 IHHQ14623 411 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 C16orf59Q7L2K0 433 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 MAVSQ7Z434 540 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 TMEM173Q86WV6 379 aaPredicted RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 CHPFQ8IZ52 775 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 TRIML2Q8N7C3 387 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 OR13J1Q8NGT2 312 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 NELL1Q92832 810 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 IGSF8Q969P0 613 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 FAM149B1Q96BN6 582 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 C12orf43Q96C57 262 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 LRGUKQ96M69 825 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 RTKNQ9BST9 563 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 MAGEB5Q9BZ81 275 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 POLR1EQ9GZS1 481 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 GIN1Q9NXP7 522 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 MARCOQ9UEW3 520 aaPredicted RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 DPP7Q9UHL4 492 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 VPS51Q9UID3 782 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 PRPF19Q9UMS4 504 aaKnown RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.56
VPS41-203ENST00000395969 PRELID1Q9Y255 219 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 INSL6Q9Y581 213 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 PCDHB12Q9Y5F1 795 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 C2orf16Q68DN1 1984 aa5.34□□□□□ -1.56
VPS41-203ENST00000395969 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 F8W810 466 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 GOLGA8MH3BSY2 632 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TLR5O60602 858 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ZBTB11O95625 1053 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 NDST3O95803 873 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 FGF4P08620 206 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 SBK3P0C264 359 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 KPNA2P52292 529 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 C21orf59P57076 290 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ZNF33BQ06732 778 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 AGERQ15109 404 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ZBED5Q49AG3 693 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PPP6R3Q5H9R7 873 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-203ENST00000395969 CHSY3Q70JA7 882 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 NUDCD3Q8IVD9 361 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PCYOX1LQ8NBM8 494 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ZNF420Q8TAQ5 688 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 PIWIL2Q8TC59 973 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 UBTD2Q8WUN7 234 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 NDRG1Q92597 394 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 KLHL5Q96PQ7 755 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PSD2Q9BQI7 771 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms