RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TBC1D3EA0A087X179 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3KA0A087X1G2 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3FA6NER0 549 aaPredicted RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3LB9A6J9 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 GAPDHSO14556 408 aaPredicted RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 PRPF4O43172 522 aaKnown RBP eCLIP13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3HP0C7X1 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 GABRG2P18507 467 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 CD9P21926 228 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 TAS2R38P59533 333 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 RAB10P61026 200 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 SIGLEC14Q08ET2 396 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 FZD5Q13467 585 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3GQ6DHY5 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3CQ6IPX1 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 CNSTQ6PJW8 725 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 LDB1Q86U70 411 aaPredicted RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3Q8IZP1 549 aaPredicted RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 GDAP1Q8TB36 358 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 SELENOSQ9BQE4 189 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 ABCG8Q9H221 673 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 FAM96AQ9H5X1 160 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 POPDC3Q9HBV1 291 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 KCNK9Q9NPC2 374 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 SNX15Q9NRS6 342 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 ANKRD6Q9Y2G4 727 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
VAPB-202ENST00000395802 A0A1W2PPM1 405 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TMEM120BA0PK00 339 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 HMX2A2RU54 273 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 FAM47DPA6NHR8 397 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 COPEO14579 308 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TPP1O14773 563 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TM9SF1O15321 606 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 RFPL1O75677 317 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 ZWINTO95229 277 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 IGLV3-19P01714 112 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 ALDOAP04075 364 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 PYGBP11216 843 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 COL6A2P12110 1019 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 CHN1P15882 459 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SLC26A3P40879 764 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 GPR1P46091 355 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TPMTP51580 245 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 GNGT1P63211 74 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SLC18A2Q05940 514 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SEMA3AQ14563 771 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 RAET1GQ6H3X3 334 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 HORMAD1Q86X24 394 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 PHYKPLQ8IUZ5 450 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 ASB12Q8WXK4 309 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 KCNJ9Q92806 393 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SCAMP4Q969E2 229 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SYTL2Q9HCH5 934 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 MKS1Q9NXB0 559 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SERGEFQ9UGK8 458 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 ACOT9Q9Y305 439 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 ZNF106Q9H2Y7 1883 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 A0A087X1B8 175 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 E5RI56 91 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 VPS26AO75436 327 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 APBB3O95704 486 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 GSTA1P08263 222 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 PKMP14618 531 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 UGT1A6P19224 532 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SAT1P21673 171 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 UGT1A1P22309 533 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 UGT1A4P22310 534 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 TEAD1P28347 426 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 AKT1P31749 480 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 UGT1A3P35503 534 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 UGT1A5P35504 534 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 MAGEA12P43365 314 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 KPNA2P52292 529 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 PPARDQ03181 441 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 LRRC14Q15048 493 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 DBN1Q16643 649 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 INSCQ1MX18 579 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 HECTD2Q5U5R9 776 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 PTRHD1Q6GMV3 140 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 ANO7Q6IWH7 933 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 C4orf33Q8N1A6 199 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 OR2T34Q8NGX1 318 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 GLYATL1Q969I3 302 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 SERAC1Q96JX3 654 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms