RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SPO11Q9Y5K1 396 aa17.85■□□□□ 0.45
CXCL12-204ENST00000395793 RGSL1A5PLK6 1076 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 PPP1R12AO14974 1030 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 NUAK1O60285 661 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 SLC4A1P02730 911 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 PLA2G2AP14555 144 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 ZNF8P17098 575 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 PTPN3P26045 913 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 CD68P34810 354 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 CDK18Q07002 472 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 NOMO1Q15155 1222 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 SLC14A2Q15849 920 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 TMC3Q7Z5M5 1100 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 SPATA16Q9BXB7 569 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 MAK16Q9BXY0 300 aaKnown RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 DDX56Q9NY93 547 aaKnown RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 NFKBIL1Q9UBC1 381 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-204ENST00000395793 INTUQ9ULD6 942 aa17.84■□□□□ 0.45
CXCL12-204ENST00000395793 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 AURKAO14965 403 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 ZIC2O95409 532 aaPredicted RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TPM1P09493 284 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 ZFXP17010 805 aaPredicted RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 SLC1A1P43005 524 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 MARCKSL1P49006 195 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 DCDC1P59894 354 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 HHEXQ03014 270 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 WASHC5Q12768 1159 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 NFATC2Q13469 925 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TRA2AQ13595 282 aaKnown RBP eCLIP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 KHDC1Q4VXA5 237 aaKnown RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TEX44Q53QW1 395 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 ZNF569Q5MCW4 686 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TMEM71Q6P5X7 295 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 IYDQ6PHW0 289 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 B3GNT4Q9C0J1 378 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 OR2AG1Q9H205 316 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 CARD9Q9H257 536 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 RMI1Q9H9A7 625 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 MAGEE1Q9HCI5 957 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 SARS2Q9NP81 518 aaKnown RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 OCIAD1Q9NX40 245 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 UBP1Q9NZI7 540 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TMPRSS11EQ9UL52 423 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 TFR2Q9UP52 801 aa17.83■□□□□ 0.44
CXCL12-204ENST00000395793 ZNF106Q9H2Y7 1883 aaKnown RBP17.83■□□□□ 0.44
CXCL12-204ENST00000395793 AKR1B15C9JRZ8 316 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-204ENST00000395793 ZW10O43264 779 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 GRID2O43424 1007 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SPOPO43791 374 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SNX2O60749 519 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 BPIP17213 487 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 GPLD1P80108 840 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 LINC00303Q3SY05 128 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SPOCD1Q6ZMY3 1216 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 ADGRG6Q86SQ4 1221 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 CNGA4Q8IV77 575 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 TC2NQ8N9U0 490 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 JPH3Q8WXH2 748 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-204ENST00000395793 ART4Q93070 314 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 TEKT5Q96M29 485 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SLC38A3Q99624 504 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 AKAP7Q9P0M2 348 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SCHIP1Q9P0W5 487 aaPredicted RBP17.82■□□□□ 0.44
CXCL12-204ENST00000395793 PDP2Q9P2J9 529 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 SLC23A2Q9UGH3 650 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 PCDHGA4Q9Y5G9 962 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 PCDHGA3Q9Y5H0 932 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 B3GALT1Q9Y5Z6 326 aa17.82■□□□□ 0.44
CXCL12-204ENST00000395793 A0A0A6YYK5 440 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-204ENST00000395793 PRR19A6NJB7 356 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 F5H423 210 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-204ENST00000395793 CST8O60676 142 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 MTX2O75431 263 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 PMPCBO75439 489 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 SLC25A14O95258 325 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-204ENST00000395793 NDST3O95803 873 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 F3P13726 295 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 NFKB1P19838 968 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 CD82P27701 267 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 HADHBP55084 474 aaKnown RBP17.81■□□□□ 0.44
CXCL12-204ENST00000395793 PLA2G4EQ3MJ16 856 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 MANEAQ5SRI9 462 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 KAZNQ674X7 775 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 CRTC3Q6UUV7 619 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 KDELC1Q6UW63 502 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 TRAM1L1Q8N609 369 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 BMPERQ8N8U9 685 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 EXD3Q8N9H8 876 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 AGBL5Q8NDL9 886 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 GLYATL1Q969I3 302 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 SGF29Q96ES7 293 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 TAAR9Q96RI9 348 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 DPYSL5Q9BPU6 564 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 HERPUD2Q9BSE4 406 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 ZSCAN5AQ9BUG6 496 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 GPR63Q9BZJ6 419 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 TRIM39Q9HCM9 518 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 PRDM8Q9NQV8 689 aa17.81■□□□□ 0.44
CXCL12-204ENST00000395793 ALG6Q9Y672 507 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms