RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TMEM207Q6UWW9 146 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 LINC00299Q6ZSB3 139 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MOB2Q70IA6 237 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 RPS27LQ71UM5 84 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 DPP10Q8N608 796 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MAGEE2Q8TD90 523 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 GIPC3Q8TF64 312 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 HMCESQ96FZ2 354 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 AURKBQ96GD4 344 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 DCUN1D5Q9BTE7 237 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 UGT2B28Q9BY64 529 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PAIP1Q9H074 479 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 LIN28AQ9H9Z2 209 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PRDM5Q9NQX1 630 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 POLR3BQ9NW08 1133 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 SFMBT1Q9UHJ3 866 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PTPRDP23468 1912 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 IGLV3-10A0A075B6K4 115 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 FAM149AA5PLN7 773 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 TBC1D4O60343 1298 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 VPS26AO75436 327 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 B3GAT3O94766 335 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 BCL10O95999 233 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MMP2P08253 660 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 SERPINF2P08697 491 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 ATXN1LP0C7T5 689 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 LINC00032P0C843 101 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MBL2P11226 248 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MTHFD2P13995 350 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 STT3AP46977 705 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 DSC2Q02487 901 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 CHRNB3Q05901 458 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PMS2P3Q13401 168 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 OR4D1Q15615 310 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 DLK2Q6UY11 383 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 CTU1Q7Z7A3 348 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PIM3Q86V86 326 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 C3orf58Q8NDZ4 430 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 TRUB1Q8WWH5 349 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC39A13Q96H72 371 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 BTN2A3PQ96KV6 586 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 TBATAQ96M53 351 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 BCL7BQ9BQE9 202 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 GPN2Q9H9Y4 310 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 MARCH4Q9P2E8 410 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 IFT80Q9P2H3 777 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 PAIP2BQ9ULR5 123 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 ST3GAL5Q9UNP4 418 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 SCML2Q9UQR0 700 aa9.98□□□□□ -0.81
UBE2D3-208ENST00000394803 CCL15-CCL14A0A0B4J2E2 113 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ARNTLO00327 626 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TNFRSF10BO14763 440 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 KLK8O60259 260 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 RAMP2O60895 175 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF623O75123 536 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ANXA6P08133 673 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 EEF1B2P24534 225 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 OXTRP30559 389 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 GJA5P36382 358 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 KCNC1P48547 511 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ARSDP51689 593 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TPD52P55327 224 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TUSC3Q13454 348 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 DAG1Q14118 895 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 GPR162Q16538 588 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CCL15Q16663 113 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ATP6AP1LQ52LC2 224 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 XKR7Q5GH72 579 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NOMO2Q5JPE7 1267 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 UGT3A1Q6NUS8 523 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 FAM117BQ6P1L5 589 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF549Q6P9A3 640 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 FRA10AC1Q70Z53 315 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TRIM74Q86UV6 250 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TRIM73Q86UV7 250 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 C8orf59Q8N0T1 100 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SVOPLQ8N434 492 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF555Q8NEP9 628 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 OR13F1Q8NGS4 319 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SCAMP5Q8TAC9 235 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 DNAJB14Q8TBM8 379 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 BPIFB1Q8TDL5 484 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 HDAC2Q92769 488 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 ITPKCQ96DU7 683 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 PLEKHA8Q96JA3 519 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 TDRD1Q9BXT4 1180 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NOL6Q9H6R4 1146 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC52A3Q9NQ40 469 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
UBE2D3-208ENST00000394803 CDC14AQ9UNH5 594 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms